Serratia sp. MYb239: CLM71_18795
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Entry
CLM71_18795 CDS
T05477
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00300
Lysine biosynthesis
serm00470
D-Amino acid metabolism
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01120
Microbial metabolism in diverse environments
serm01230
Biosynthesis of amino acids
Module
serm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CLM71_18795
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLM71_18795
Enzymes [BR:
serm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CLM71_18795
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AVJ20164
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All DBs
Position
complement(3938965..3940221)
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AA seq
418 aa
AA seq
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MPRALHDTSTALNAANLLTLPARFGCPVWAYDAQIVRERIAQLRHFDVIRFAQKACSNIH
ILRLMREQGVRVDSVSLGEIERALHAGYQPGGEEIVFTADVLDQATLARVCELKVPVNAG
SIDMLEQLGQHDDGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEVIQRHG
LKLLGVHMHIGSGVDYQHLERVCDAMVQQVIALGMDIGAISAGGGLSIPYQAGEEAIDTE
HYFGLWNSARERIAAHLGHPVKLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGF
NDLMRPAMYGSYHHISLLPADGRATDAQPLRDTVIAGPLCESGDVFTQQAGGGVETRALP
PVQVGDYLVFHDTGAYGSSMSSNYNSRPLLPEVLFDRGEARLIRRRQTIEELIALEQV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgctttacatgacacctccaccgcattgaacgccgccaatttactcacgctg
ccggcccgcttcggctgcccggtttgggcctacgatgcgcagatcgtccgtgaacgtatc
gcacagctgcgtcactttgacgtgatccgcttcgcccagaaggcctgttcgaatattcat
attctgcgcctgatgcgcgagcagggcgtccgggtggattccgtatcgctgggagaaatt
gagcgtgcgctgcatgccggctatcagccgggtggtgaagagattgtctttactgccgac
gtgctggatcaggcgacgctggcgcgcgtctgcgagctgaaagttccggtaaatgccggt
tctatcgatatgctggagcagttggggcagcacgatgacgggcacccggtgtggctgcgc
atcaacccgggctttggtcatgggcacagccagaaaaccaataccggtggtgaaaacagc
aagcacggcatttggtatgccgatttgccgcaggcggtggaagtgattcaacgccatggc
ctgaagctgctgggcgtacatatgcatattggctcaggcgtggattatcagcatctggag
cgtgtatgcgacgccatggtgcagcaggtgattgcgctggggatggatattggggcgatt
tccgccggcggcggcctgtcgattccgtatcaggccggcgaagaggcgatcgataccgaa
cactattttggcctgtggaacagcgcgcgcgagcgcattgccgcccacctggggcacccg
gtcaaactggagatcgagccggggcgcttcctgatggccgaggcgggcgtgctggtagcg
gaagtgcgcgcggtgaaagatatgggcagccgtcactttgtgttggtcgacgccggtttt
aacgacctgatgcgcccggcaatgtacggcagctatcaccatatttcgctgctgcctgcc
gacggacgcgctaccgatgctcaaccgctgcgcgatacggtgattgccgggccgctgtgc
gaatccggcgatgtgtttacccagcaggcgggcggcggggtggaaacccgggcattgccg
ccggtgcaggtgggcgactatctggtgttccacgacaccggcgcttacggttcctccatg
tcctccaactacaacagccggccgctgctgccggaggtcctgtttgatcggggtgaggcg
cggctgattcgtcgccggcagaccattgaagagctgatcgcgctggaacaggtataa
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