Serratia sp. MYb239: CLM71_19375
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Entry
CLM71_19375 CDS
T05477
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM71_19375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serm03019
]
CLM71_19375
Enzymes [BR:
serm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CLM71_19375
Messenger RNA biogenesis [BR:
serm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLM71_19375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AVJ20170
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All DBs
Position
4065530..4067077
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AA seq
515 aa
AA seq
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MFTRVANFCRKVLIGDDKSARDDAPANNHEPVRTERADAQKPAAPRQRSADKGREHAGRR
PAPRKRAPSSAAEGTRPMTVIPREQHAISRKDISENALKVLYRLNKSGFEAYLVGGGVRD
LLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQNP
EHDKNSSQQAQSGMLLRDNIFGSIEEDAQRRDFTINSLYYGVADFALRDYVGGLRDLQQG
VIRLIGDPETRYREDPVRMLRAVRFAAKLDMTISEETAEPIPRLASLLHDIPPARLFEES
LKLLQSGYGFQTYLKLCEYQLFQPLFPLIARQFTPNHNTPMERILVQVLKNTDHRLQNNM
RVNPAFLFAAMLWYPLLEHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLV
RDIWQLQLRLSRRQGKRAHKLMEHPKFRAAYDLLALRAQVENNPEMQRLTEWWAEFQDAT
PARQKTMLSSLGDDPAPRRSRQRRPRRRAPRKEGA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtagccaatttctgccgtaaggtactcatcggcgacgacaaatcagcc
cgcgatgatgcgccggccaacaatcacgagccggttcgcacagagcgcgccgacgcccag
aagcctgccgcgccgcgccagcgttccgccgataaaggccgggagcatgccggccgtcgc
cctgcgccgcgtaagcgcgcgccgtcatccgccgccgagggaacgcgccctatgaccgtg
atcccacgtgagcagcatgcgatttcgcgtaaagatatcagtgaaaacgccctgaaggtg
ctgtaccgcctgaataagtccggctttgaagcctacctggtcggcggcggcgtacgcgat
ttgctgctgggtaagaaaccaaaagactttgatatcaccaccaacgccacgccggagcag
gtacgcaagctgttccgcaactgccgtctggtcggccgccgcttccgtctggcgcacgtg
atgttcgggccggaaatcattgaggtcgccacgttccgcggccatcatgagcagaatccg
gagcacgacaagaattcctcccagcaggcccaaagcggcatgctgctacgcgacaatatc
ttcggttccattgaggaagacgcccagcgtcgcgacttcaccatcaacagcctgtactac
ggcgtagcggacttcgccctgcgcgactatgtcggcggcctgcgcgatctgcaacagggc
gtgattcgcctgattggcgatccggaaacccgctaccgcgaagacccggtgcgcatgctg
cgcgcggtgcgcttcgccgccaagctagatatgaccatcagcgaagaaaccgccgagccg
attccgcgcctggcgtcgctgctgcacgatattccgccggcgcgcctgtttgaagagtcg
ctgaagctgctgcagtccggctacggcttccagacctacctgaaactgtgcgaataccag
ctgttccagccgctgttcccgctgatcgcccgtcagttcacgccgaaccacaatacgccg
atggagcgtattctggtgcaggtgctgaaaaacaccgaccaccgtctgcagaacaatatg
cgcgtcaacccggcgtttctgttcgccgccatgctgtggtatccgctgctggagcacgcg
cagaaactggcgcaggagagcggcctggcctattacgacgccttcgcgctggcgatgaac
gacgtgctggacgagcagtgccgctcgctggcgatcccgaaacgcatcaccacgctggtg
cgcgatatctggcagctgcagctgcgtctgtcgcgtcgtcagggcaagcgtgcgcacaag
ctgatggaacatccgaaattccgcgccgcctacgatctgctggcgctgcgcgcccaggtg
gagaacaacccggagatgcagcgcctgaccgaatggtgggccgagttccaggatgcgacg
ccggcgcgacaaaaaaccatgctcagctcgctgggcgacgatcccgcgccgcgccgttca
cgtcagcgccggccgcgccgccgcgcgccgcgtaaagaaggggcataa
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