KEGG   Serratia sp. MYb239: CLM71_19545
Entry
CLM71_19545       CDS       T05477                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
serm  Serratia sp. MYb239
Pathway
serm00010  Glycolysis / Gluconeogenesis
serm00020  Citrate cycle (TCA cycle)
serm00260  Glycine, serine and threonine metabolism
serm00280  Valine, leucine and isoleucine degradation
serm00310  Lysine degradation
serm00380  Tryptophan metabolism
serm00620  Pyruvate metabolism
serm00630  Glyoxylate and dicarboxylate metabolism
serm00640  Propanoate metabolism
serm00670  One carbon pool by folate
serm00785  Lipoic acid metabolism
serm01100  Metabolic pathways
serm01110  Biosynthesis of secondary metabolites
serm01120  Microbial metabolism in diverse environments
serm01200  Carbon metabolism
serm01210  2-Oxocarboxylic acid metabolism
serm01240  Biosynthesis of cofactors
Module
serm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
serm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
serm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
serm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:serm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CLM71_19545 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CLM71_19545 (lpdA)
   00620 Pyruvate metabolism
    CLM71_19545 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CLM71_19545 (lpdA)
   00640 Propanoate metabolism
    CLM71_19545 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CLM71_19545 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CLM71_19545 (lpdA)
   00310 Lysine degradation
    CLM71_19545 (lpdA)
   00380 Tryptophan metabolism
    CLM71_19545 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CLM71_19545 (lpdA)
   00670 One carbon pool by folate
    CLM71_19545 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:serm04147]
    CLM71_19545 (lpdA)
Enzymes [BR:serm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CLM71_19545 (lpdA)
Exosome [BR:serm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CLM71_19545 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA FAD_binding_2 HI0933_like AlaDh_PNT_C NAD_binding_8 Thi4 FAD_binding_3 DAO Lycopene_cycl
Other DBs
NCBI-ProteinID: AVJ19170
LinkDB
Position
complement(4100325..4101749)
AA seq 474 aa
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDINKIRTWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLVVEGENGPTTINFDNAIIAAGSRPIQLPFIPHDDPRVWDSTDALELKTVPERMLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDADKAGVAVDERGFINVDKQ
MRTNVPNIFAIGDIVGQPMLAHKGVHEGHVAAEVISGLKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGMAAEMFEGSITDLPNPKAKKK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtactgaaataaaaactcaggtcgtggtacttggggcgggcccagcaggctactct
gctgcctttcgttgcgctgacttaggtcttgaaaccgttctggttgaacgttattccacg
ctgggcggggtttgcctgaacgtgggatgtatcccttccaaagcactgttgcacgttgcc
aaagtgattgaagaagccaaagcactggctgaacacggcatcgttttcggtgagccgaaa
accgacatcaacaagatccgtacctggaaagagaaagtcatcactcagctgaccggcggt
ctggcgggtatggctaaaggccgtaaagttaaagtggttaacggtctgggcaaatttacc
ggcgctaacaccctggttgttgaaggcgaaaacggtccgaccaccatcaacttcgataac
gccatcattgccgcaggttctcgtccaatccaactgccatttatccctcatgatgaccca
cgcgtgtgggattccaccgatgcgctggagctgaaaaccgtcccagagcgtatgctggtg
atgggcggcggtatcatcggtctggaaatgggcaccgtctaccacgcgctgggttctcag
attgacgtggtggaaatgttcgaccaggtgatcccggcggcagataaagacgtggtgaag
gtgttcaccaagcgtatcagcaagcagttcaacctgatgctggaaaccaaagtgactgcg
gtagaagccaaagaagatggtatctacgtcacgatggaaggcaaaaaagcgcctgcggaa
ccacagcgttatgacgcggtgctggtggctatcggccgtgtgccgaacggtaaactgctg
gatgccgacaaagcgggcgtggcggttgatgagcgcggctttatcaacgttgacaagcag
atgcgcaccaacgtaccgaacatcttcgccatcggcgatatcgtcggccagccgatgctg
gcgcacaaaggcgtgcatgaaggccacgtggcggcggaagttatctccggtctgaagcac
tacttcgatccgaaagtgattccatccatcgcgtataccgagccggaagtggcatgggta
ggtctgaccgagaaagaagcgaaagagaaaggcatcagctatgaaaccgccaccttcccg
tgggcggcgtccggccgtgctatcgcttccgactgtgcagacggcatgaccaaactgatc
ttcgacaaagagactcaccgtgttatcggcggggcgattgtcggcaccaacggcggcgag
ctgctgggtgagatcggtctggctatcgagatgggttgtgatgcggaagatatcgcgctg
accatccacgctcacccaaccctgcacgaatcggtaggtatggcggctgagatgtttgaa
ggcagcattaccgacctgcctaacccgaaggccaagaaaaagtaa

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