Serratia sp. MYb239: CLM71_21275
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Entry
CLM71_21275 CDS
T05477
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serm03019
]
CLM71_21275
03009 Ribosome biogenesis [BR:
serm03009
]
CLM71_21275
Messenger RNA biogenesis [BR:
serm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLM71_21275
Ribosome biogenesis [BR:
serm03009
]
Prokaryotic type
rRNA processing factors
CLM71_21275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AVJ19493
LinkDB
All DBs
Position
complement(4465383..4466852)
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AA seq
489 aa
AA seq
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MTAELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI
GLEKAAFLHASDIMPHTECVAGDERKNFHVRDIAELVRQGQDLVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGAAHVGVSQRIESEAERERLKKIVADYCDELGGFIIRTAAEGIGDE
ELAQDAAFLKRLWTKVMERKKRNQTKYMLYGELALAQRILRDFAGAALDRIRVDSRLTHD
LLVEFTGEYIPDISGKLELYTGSQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNDEHRRRV
LHSLEQALSKDRVKTTINGFSQLGLVEMTRKRTRESIEHVLCNDCPTCNGRGTVKTVETV
CYEILREIVRVHHAYDTDRFLVYASAAVGEALKSEESHALAEVEIFVGKQVKVQIEPLYS
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagctactggtaaatatcacaccgtctgaaacgcgggttgcctatattgac
ggcggcatcctgcaagagatccacatcgaacgcgaatccaagcgcggcatcgtcggcaat
atctacaaaggccgggtgagccgggtgctgccgggcatgcaggcggcctttgtcgatatc
ggcctggagaaggcggcgtttctgcacgcctccgatattatgccgcacaccgagtgcgtg
gcgggcgatgaacggaaaaacttccacgtgcgcgatatcgccgaactggtgcgccagggg
caggatctggtggtgcaggtggtaaaagatccgctgggcaccaaaggtgcgcgcctgacc
accgacatcacgctgccttcccgctatctggtatttatgccgggcgcggcgcacgtcggc
gtttcgcagcgtattgaaagcgaggccgagcgcgaacggctgaaaaaaatcgtcgccgat
tactgcgacgagctgggcggctttatcatccgcaccgcggcagaaggcattggtgatgag
gaactggcgcaggacgccgcgttcctcaagcgcctgtggaccaaagtgatggagcgtaaa
aagcgcaaccagaccaaatatatgctgtacggcgaactggcgctggcgcagcgtatcctg
cgtgatttcgccggcgcggcgctcgatcgcatccgcgtggactcgcgcctgacgcacgat
ttgctggtggagttcaccggcgaatatatcccggacatcagcggcaagctggagttatat
accggcagccagccgatcttcgatctgtacgacgtggagaacgaaatccagcgtgcgctg
gagcgtaaggtggagctgaagtccggcggttatctgatcatcgatcagaccgaggcgatg
accaccatcgatatcaacaccggcgcctttgttggccaccgtaacctcgacgaaaccatt
ttcaataccaatattgaagcgacgcaggctatcgcccgccagctgcggctgcgtaatctt
ggcggcattattatcatcgattttattgatatgaataatgatgaacaccgccggcgggtg
ctgcactcgctggagcaggcgctgagcaaggatcgggtcaaaaccaccatcaacggtttt
tcacagcttgggctggtggaaatgacgcgtaaacgcacgcgtgaaagtattgaacatgtg
ctgtgcaacgactgtcctacctgtaacgggcgcggcacggtcaagacggttgagacggta
tgctatgaaatcttgcgcgaaatcgtccgcgtgcaccatgcttatgataccgaccgtttt
ctggtttacgcctcggccgcggtaggcgaagcgctgaaaagcgaggagtcgcacgcgctg
gcggaggtggaaatcttcgtcggcaagcaggttaaagtacagattgaaccgttatacagc
caggagcagtttgacgtcgttatgatgtaa
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