KEGG   Serratia sp. MYb239: CLM71_21460
Entry
CLM71_21460       CDS       T05477                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
serm  Serratia sp. MYb239
Pathway
serm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:serm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLM71_21460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:serm03400]
    CLM71_21460
DNA repair and recombination proteins [BR:serm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLM71_21460
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CLM71_21460
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_25 AAA_23 NACHT nSTAND3 Viral_helicase1 cobW ScfRs ExoX-like_C
Other DBs
NCBI-ProteinID: AVJ19526
LinkDB
Position
4500925..4503753
AA seq 942 aa
MDNIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHHVPLAAQTVSQMVDNVLTQPEGKRLMLLAPIVKDRKGEHTKTLENLATQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALELSGGTAVVADMDDD
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVVQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHYQFDVEAPFNSLSASVQKAVLNGSGKESIEFKY
INDRGDTTVRRHPFEGVLHNMERRYKETESSAVREDLAKFISNRPCTSCHGTRLREEARN
VFVEDTTLPEISDLSIGHAMTFFQNIKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQIVAEGSVEDIMAKPDSLTGQFLSGKREIAI
PQERVAADPNKVLKLSGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATLAEPAPFREVAGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE
SRSRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLEMTIEEARGFFDAVPALARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECRESHTARFLKPLLKR
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggacaatatcgaagttcgtggtgctcgaacccataatctcaaaaacatcaacctgatc
atcccgcgcgacaaactgattgtggtcaccgggctgtccggctccggcaagtcctcgctg
gcctttgatacgctgtatgccgaggggcagcgccgctacgtcgaatcgctctccgcctat
gcccgccagttcctgtcgctgatggaaaaaccggacgtcgaccatattgaagggctgtcg
ccggcgatctccatcgaacagaaatcgacctcgcacaacccgcgttccaccgtcggcacc
atcaccgaaattcatgactatctgcgcctgctgttcgcccgcgtcggcgagccgcgctgc
ccggaccaccacgtgccgctggcggcgcagaccgtcagccagatggtcgacaacgtgctc
acccagccggaaggcaaacgcctgatgctgctggcgccgatcgtcaaagatcgcaaaggc
gaacacaccaaaacgctggagaacctggcgacgcagggctatatccgcgcgcgcatcgac
ggcgaagtgtgcgatctgtccgatccgccgaagctggagctgcagaagaagcacaccatc
gaggtggtggtcgaccgctttaaagtacgcgaagacctggcgcagcggctggcggagtcg
tttgaaaccgcgctggaactgtccggcggcaccgcggtggtggccgatatggacgatgac
aaagcggaagagctgctgttctccgccaacttcgcctgtccgatctgtggttacagcatg
cgcgagctggagccgcgcctgttctcgttcaacaacccggccggcgcctgcccgacctgc
gacggcctgggcgtgcagcagttcttcgacccggatcgcgtagtgcagaacccggagctg
tcgctggccggcggcgccatccgcggctgggatcgccgtaatttctactatttccagatg
ctgcgctcgctggcggagcattatcagttcgacgtcgaagcgccgttcaacagcctgagc
gccagcgtgcaaaaagcagtgctgaacggttccggcaaagagtcgatcgagtttaaatac
atcaacgatcgcggcgacaccaccgtgcgccgccatccgtttgaaggcgtgctgcacaat
atggagcgccgctataaagagaccgaatccagtgcggtgcgcgaggatctggccaaattt
atcagcaaccgtccgtgcacctcctgccacggcacccgcctgcgtgaagaagcgcgcaac
gtgtttgtcgaagacaccacgctgccggagatttcggatctcagcatcggccacgcgatg
accttcttccagaacatcaagctgagtggccaacgcgccaaaatcgccgagaaagtgctg
aaagagatcggcgaccgcctgaagtttctggttaacgtcggcctaaactacctgtcgctg
tcgcgctcggcggaaaccctgtccggcggcgaggcccagcgcatccgcctggcgagccag
atcggcgccggcctggtgggcgtgatgtacgtactggacgagccgtccatcggcctgcac
cagcgcgacaacgaacgcctgctggaaacgctgatccacctgcgcaacctgggcaacacg
gtgatcgtggtggagcatgacgaagacgccatccgcgccgccgaccacgtgatcgatatc
ggccccggcgccggcgtacacggcggccagatcgtcgccgaaggcagcgtggaagacatc
atggccaagccggactcgctgaccggccagttcctcagcggcaagcgcgaaatcgccatt
ccgcaggagcgcgtggcggcagacccgaacaaggtgctgaaactgagcggcgcgcgcggc
aacaacctgaaggacgtgacgctgacgctgccggtggggctgttcacctgcatcaccggg
gtgtccggctccggcaaatcgacgctgatcaacgatacgctgttcccgatcgcccagcgc
cagctgaacggcgccaccctcgccgaaccggcgccgttccgcgaggttgccggccttgaa
cacttcgacaaggtgatcgacatcgatcaaagcccgatcggccgtacgccgcgttccaac
ccggctacctacaccggcattttcaccccggtgcgcgaactgttcgccggcgtgccggaa
tcacgcagccgcggttataccccgggccgcttcagctttaacgtgaaaggcggccgctgc
gaagcctgccagggcgacggcgtaatcaaggtggaaatgcacttcctgccggacatttat
gtgccctgcgaccagtgcaaaggcaagcgctacaaccgtgaaacgctggagatcaaatac
aagggcaaaagcattcacgaagtgctggagatgaccatcgaagaagcccgcgggttcttc
gacgcggtgccggcgctggcgcgcaagctgcaaaccctgatggatgtcggcctgtcctat
atccgtcttggccagtcggcgaccacgctgtccggcggtgaagcacagcgcgtcaaactg
gcgcgcgagctgtccaagcgcggcaccggccagacgctgtatatcctggatgagccgacc
accggcctgcactttgccgacatccagcagttgctggcggtgctgcatcagctgcgcgat
cagggcaataccatcgtggtgattgagcacaatctcgacgtgatcaaaaccgccgactgg
attgtcgatctggggccggaaggcggcagcggcggcggcgagatcctggtgtccggcacg
ccggaaaccgtggcggaatgccgggaatcacacaccgcgcgcttcctcaagccgctgctg
aaacgctga

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