Serratia sp. MYb239: CLM71_21830
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Entry
CLM71_21830 CDS
T05477
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLM71_21830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serm03021
]
CLM71_21830
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_21830
Enzymes [BR:
serm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLM71_21830
Transcription machinery [BR:
serm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLM71_21830
DNA repair and recombination proteins [BR:
serm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLM71_21830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AVJ19593
LinkDB
All DBs
Position
complement(4585790..4586779)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagacatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcaaggcaaagatgaagttattctt
accctgaataaatctggcattggccctgtgaccgctgccgacattacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgttatctgccacctgaccgatgagaacgcggctatc
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggtcgtctgttggtcgacgcctgctacagccctgta
gagcgtattgcctacaatgttgaagctgcgcgtgtagaacagcgtactgacttggataag
ctggtcatcgaaatggaaaccaatggcacgatcgatcctgaagaggcgatccgccgtgcg
gcaaccattctggctgaacaactggaagctttcgttgacttacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcttgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcctcacgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgacgagtaa
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