Serratia sp. MYb239: CLM71_23170
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Entry
CLM71_23170 CDS
T05477
Symbol
rfaQ
Name
(GenBank) putative lipopolysaccharide heptosyltransferase III
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00540
Lipopolysaccharide biosynthesis
serm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CLM71_23170 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
serm01005
]
CLM71_23170 (rfaQ)
Enzymes [BR:
serm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
CLM71_23170 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
serm01005
]
Core region
CLM71_23170 (rfaQ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_trans_4_2
Motif
Other DBs
NCBI-ProteinID:
AVJ19840
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All DBs
Position
4863833..4864912
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AA seq
359 aa
AA seq
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MNDASAPIPATSIQRILVIKLRHHGDMLLTTPVINTLKANYPQAQIDVLLYQETQDMLAS
NPAISRIFAIDRQWKKQGAKAHMGHEWRLIRQLQAQRYDLVVNLADQWRSALITRLTGAR
IRLGFAFPKRRGFLWQHCHTQLVSVETHGTLHTVEQNLSLLQPLGLPLSDTQVTMSYAEQ
DWQSSETLLRQHDVPHDYIVVQPTSRWFFKCWSEEKMAAVITALQADGHTVVITSGPDEK
ERKMVNNILAHCPKQGVVSLAGQLTLRQLAAIIDHAKLFIGVDSVPMHMAAALKTPCIAL
FGPSKLTFWRPWQVIGQVIWAGDYGPLPDPDAVNTGTDERYLNLIPTDAVITAARSQLS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcgtcagcaccgatcccagcaacatcgatacagcgtattttagttattaag
ctgcgccaccacggcgatatgctgctgaccacgccggtcatcaatacgctaaaagctaac
tacccgcaggcgcagatagacgtgctgctgtaccaggaaacgcaggatatgttagccagc
aacccggcaatatcacggatattcgccattgaccgccagtggaaaaaacagggcgccaag
gctcatatgggccatgaatggcgcctgatccgccagttgcaggcgcaacgttacgatctg
gtggtgaacctggccgaccaatggcgcagcgcgctgattacgcgcctgacgggcgcacgc
atccgtttgggctttgctttccccaaacgccgtggttttctctggcagcattgccatacg
caactcgtctccgtcgaaacccatggcaccttgcatacggtggagcagaacctttctttg
ctgcagccgcttggtctgccactcagcgatacgcaggtcaccatgagctatgccgagcag
gattggcagagcagcgaaacgctgctgcggcagcacgatgtaccgcatgactatatcgtc
gtgcagcccacctcgcgttggttctttaaatgctggagcgaagagaaaatggcggcggtc
atcacggccctgcaggccgatggccacacggtggtcattacctccggccccgatgagaaa
gagcgtaaaatggtgaacaacattctggcgcactgccccaaacagggcgttgtgtcgctg
gcaggacagctcaccctgcggcaactggcggcaatcatcgatcacgccaagctgtttatt
ggcgtagactccgtgcccatgcatatggccgccgcgctgaaaacgccctgcatcgcgctg
tttggcccgtccaagctgacgttctggcgcccatggcaggttatcggccaggttatctgg
gccggcgactacgggccattgcccgatccggacgcggttaacaccggtaccgatgagcgt
taccttaaccttattcctacagacgcggtgattactgccgcgcggagccagctttcatga
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