Serratia sp. NGAS9: GUC32_00860
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Entry
GUC32_00860 CDS
T10949
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sern Serratia sp. NGAS9
Pathway
sern03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUC32_00860 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sern03019
]
GUC32_00860 (recQ)
03400 DNA repair and recombination proteins [BR:
sern03400
]
GUC32_00860 (recQ)
Enzymes [BR:
sern01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GUC32_00860 (recQ)
Messenger RNA biogenesis [BR:
sern03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GUC32_00860 (recQ)
DNA repair and recombination proteins [BR:
sern03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GUC32_00860 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
DUF6972
Motif
Other DBs
NCBI-ProteinID:
QHI76208
UniProt:
A0AAX1G1V9
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All DBs
Position
193101..194933
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AA seq
610 aa
AA seq
DB search
MSTAAVINRELLAEQVLRDTFGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLLAYGVSAACYNSTQTREEQLDVMAGCRNGNIKMLY
IAPERLMMESFLNLLDHCPPAMLAVDEAHCISQWGHDFRPEYRALGQLKQRFPSMPVIAL
TATADESTRGDIVRLLSLQDPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCLEEKPAGQQ
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGKHENCGNCDICLDPPKRYDGLEDARKAL
SCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGRDQTTEHWTSVLRQLIHLG
FITQNIAMHSALQLTEAARPVLRGEVALQLAVPRIQSLKSRSSTNQKSYGGNYDRKLFAK
LRKLRKSIADEENIPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAM
IRDHLDNDED
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccgcagcagtgattaacagagagttgctggccgagcaggtattgcgcgatacc
tttggctaccagcaattccgtccggggcagcaaacgattatcaacgccgcgatcggcggg
caggattgcctggtggtgatgccgaccggcggcggcaagtcgttgtgctaccaaatcccg
gcgctggtgatggacggcctgacgctggtcgtttccccactgatctcgctgatgaaggac
caggtcgaccaactgttggcctacggcgtttccgccgcctgctataactcgacgcaaacc
cgcgaggagcagctggacgttatggccggctgccgcaacggtaacatcaagatgctgtac
atcgcgccggaacggctgatgatggaaagcttcctcaacctgctcgaccactgcccgccg
gcgatgctggcggtggatgaggcgcactgcatctcgcagtggggccatgacttccggccg
gaatatcgcgcgctgggccaactgaaacagcgcttcccgtcgatgccggtgatcgcgttg
actgccaccgccgacgagtccacccgcggcgatatcgtgcgtctgctgtcgctgcaggat
ccgctggtgcaggtcagcagcttcgaccggccgaacatccgttacacgctggtggaaaaa
ttcaaaccgctcgaccagctgtggcgcttcgtgcaggatcagcgcggcaagagcggcatt
atctattgtaacagccgcgccaaggtggaagacaccgctgcgcgcctgcaaagccgcggg
ctgagcgtcggtgcctaccacgccgggctggacaacgatcgccgcgcgcaggtgcaggaa
gcgttccagcgcgacgatctgcaggtggtggtggccaccgtcgccttcggcatgggcatc
aacaaacccaacgtgcgcttcgtggtgcatttcgacatcccgcgcaatatcgaatcctat
tatcaggagaccggccgagccgggcgcgacggcctgccggccgaagccatcctgctgtac
gatccggccgacatggcctggctgcgccgctgcctggaggagaaacccgccgggcaacag
ctggacatcgaacgccacaagctgaacgccatgggcgctttcgccgaggcgcaaacctgc
cgtcgcctggtgctgctcaactacttcggcgaaggcaagcacgagaactgcggcaactgc
gacatctgcctcgatccgcccaagcgctacgacgggctggaggacgcgcgcaaggcgctg
tcctgcgtgtaccgcgtcggccagcgctttggcctcgggtacatcgtggaagtgctgcgc
ggctccaacaaccaacgcattcgtgaatacggtcacgacaagctgccggtgtacggcatc
ggccgcgatcaaaccaccgaacactggaccagcgtgctgcgtcagctgatccacctgggc
tttatcacccagaacatcgccatgcactcggcgctgcaattgaccgaggcggcgcgtccg
gtgttgcgcggcgaggtggcgctgcagctggcggtgccgcgtattcagagcctgaagtcg
cgcagcagcaccaaccagaaatcctacggcggcaattacgatcgcaagctgttcgccaag
ctgcgcaaactgcgcaaatcgatcgccgacgaagaaaacattccgccctacgtggtgttc
aacgacgccacgctgctggaaatggccgaacagatgccgatcaaggccggcgatctgctg
agcgtcaacggcgtcggccagcgcaaactggagcgtttcggcgcgccctttatggcgatg
atccgcgaccatctcgacaatgatgaagactga
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