Serratia sp. NGAS9: GUC32_01170
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Entry
GUC32_01170 CDS
T10949
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sern Serratia sp. NGAS9
Pathway
sern00071
Fatty acid degradation
sern00280
Valine, leucine and isoleucine degradation
sern00310
Lysine degradation
sern00362
Benzoate degradation
sern00380
Tryptophan metabolism
sern00410
beta-Alanine metabolism
sern00640
Propanoate metabolism
sern00650
Butanoate metabolism
sern00907
Pinene, camphor and geraniol degradation
sern00930
Caprolactam degradation
sern01100
Metabolic pathways
sern01110
Biosynthesis of secondary metabolites
sern01120
Microbial metabolism in diverse environments
sern01200
Carbon metabolism
sern01212
Fatty acid metabolism
Module
sern_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GUC32_01170 (fadB)
00650 Butanoate metabolism
GUC32_01170 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
GUC32_01170 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GUC32_01170 (fadB)
00310 Lysine degradation
GUC32_01170 (fadB)
00380 Tryptophan metabolism
GUC32_01170 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GUC32_01170 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GUC32_01170 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GUC32_01170 (fadB)
00930 Caprolactam degradation
GUC32_01170 (fadB)
Enzymes [BR:
sern01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GUC32_01170 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GUC32_01170 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GUC32_01170 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
GUC32_01170 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QHI76269
LinkDB
All DBs
Position
complement(257531..259720)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNASGSVNKLDTRTVASLGEALTVLENQPELKGLLLRSS
KAAFIVGADITEFLSLFAAPAEKLHEWLVFANNVFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLAEAALKMLQQAIDGKLDWRAARQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKNVDAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLTLGMNEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVENLIGE
ETVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDETIAKVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMSKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDNKGKP
RKENDEQTDALLAEVSQPRQTISDEEIVARMMIPMINEVVRCLEEKIVASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAERNESYYPVATPL
SDVATRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgataacggcatcgccgagctg
gtgttcaacgcatcaggctcggtcaacaagctggacacccgcaccgtcgccagcctgggt
gaagcgctcaccgtgctggaaaaccagcctgagctcaaggggttgctgctgcgctcctcc
aaagccgcgtttatcgtcggcgccgatatcaccgaattcctttctctgttcgccgcaccg
gctgaaaagctgcacgagtggctggtattcgccaacaacgtctttaaccggctggaagat
ttgccggtaccgaccatttcggccattaacggctatgcactcggcggcggttgcgaatgc
attctggcgaccgatttccgcgtcgcctcaccggacgcgcgcatcggcctgccggaaacc
aaattgggcatcatgccgggcttcggcggttccgtccgcctgccacgcctgctgggtaac
gacagcgcgctggaaatcatcgccgccggcaaagacgtcagcgccaaagacgcgttgaaa
gtcggcctggtggatgcggtggtagcaccggaaaaactggccgaagcggcgctgaaaatg
ctgcaacaggcgatcgacggcaagctggactggcgcgccgcgcgtcaacctaagctggag
ccgctgaagctcagcccgatcgaagcggcaatgagcttcaccaccgccaaaggcatggtg
ctgcagaccgccggtaaacattacccggcaccgatgaccgcggtgaaaaccattgaagcc
gccgccaagctgggccgcgatgaggcactgaaactggaaaccgccagcttcgtgccgttg
gcacgatccaacgaagcgcgtgcgctggtcggcatcttccttaacgatcagttcgtgaaa
ggccaggcgaaaaagctggccaagaatgtggacgcgccgaaacaggcggcggtgctgggc
gccggcatcatgggcggtggcatcgcctaccaatcggcgctgaaaggcgtgccggtgatc
atgaaggacatcagcgacaaatcactgacgctgggcatgaacgaagcggccaagctgctc
aataagcagctggaacgcggcaaactggatggcctgaaaatggcgcaggtgctgtcgacc
attcaaccaacgttggactacgccggcatcgagcgcgcgcaggtgatcgtcgaagcggtc
gtggagaacccgaaggtcaaagccgccgtactgtcggaagtggaaaacctgatcggcgaa
gagaccgttctggcgtcgaacacctcgaccattccgattaatcacctggcaaaatcgttg
aagcgcccgcaaaacttctgcggcatgcacttctttaacccggtacaccgcatgccgctg
gttgaaatcatccgcggcgaacaaaccagcgacgagaccattgccaaagtggtggcctac
gccagccgcatgggcaaaacgccgatcgtggtgaacgactgcccgggcttcttcgtcaac
cgcgtgctgttcccatacttcgccggtttcagcctgctgctgcgcgacggcgccgacttc
cgtcagatcgataaagtgatggaaaaacagttcggttggccgatgggcccggcctacctg
ctcgacgtggtgggcatcgacaccgcacaccacgcgcaagcggtaatggccgccggcttc
ccggagcgcatgagcaaagactatcgcgatgccattgacgtgatgttcgacaaccagcgc
ttcggtcagaaaaaccagctgggcttctaccgctacagccaggacaacaaaggtaagccg
cgcaaggaaaacgacgagcagaccgatgcgctgctggccgaagtgagccaaccgcgccag
accatcagcgacgaagagatcgttgcgcgcatgatgatcccgatgatcaacgaagtggtg
cgttgcctggaagagaagatcgtcgccagcccggcggaagccgatatggcactggtgtac
ggcatcggcttccctccgttccatggcggcgcattccgctacctggatacgctcggcacc
gccaactacgttgagctggcccagcgttacgcacacctcggcgccctgtatcaggtgccg
gccggtctgcgcgccaaggccgagcgcaatgaaagctactacccggtggcgacaccgctg
tccgacgtcgctacccgccaaccggcatga
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