Serratia sp. NGAS9: GUC32_04610
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Entry
GUC32_04610 CDS
T10949
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sern Serratia sp. NGAS9
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sern03400
]
GUC32_04610 (sbcC)
DNA repair and recombination proteins [BR:
sern03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GUC32_04610 (sbcC)
Archaeal homologous recombinant proteins
GUC32_04610 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
cobW
AAA_15
AAA_21
NTPase_1
TsaE
GTP_EFTU
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHI76892
UniProt:
A0AAX1G4F6
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All DBs
Position
complement(978184..981435)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLELTATITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDGLHQRASGIELLNDEQRQSLTEQLTALSAQEIALGEQTQR
QQQALSWLQQWQRLRQQQGEGQRRLETAQREQAEAAPQLQQLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQHSAQLAPLQQAVEKARLAQQTHAEHMRQQQQLIDEQVAP
LDHQIAQLQSTQAERRQAADATTQQCAQQQTTLEQLTAQRSQLTAQGALHQQQLNALNEA
LAVQQQQQQALEAQTPLAPLRQRLSALADLRPTRQQLFTLASLNRQTRERLARQQAEHAE
RQTQLAGLQQQLESARQQFKQHKAQLQEVEQIHELEKRIVSLEAERALLQSGAPCPLCGS
TSHPAVEQYQAVQPSATEQRLVEMRTLTEKLQTQGTELRTRCEGLQEQQQRQQQTIAQDE
QQLAAQQQQWQQLSAPLAFDFTLAESERLSAWLSGCDDEERRGQHALQQHEQAAQAVQQA
KDALAALQTQQQQAQQQLALLEERFTLLQKTYADSLQQQQDLQQRWQEGEKTLAERRAQR
LALFGEQRVAEVREQLRAKQTASEQASLQAAEQWQKAQELRERLTGQQAGLQQQHTLMQE
RLQQAQQQWQQALADSEFADETAFTAALLDDTLRRELQQRREQLQQRQVEAAALLTQATQ
TLEQHRLNRPEGVDEANTDLDALTQSLAELAQQLKTLQLRQGELRNQLESDAARRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANQQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagcctgcggttaaaaaacctcaactcgctgcagggcgaatggaaaatt
gacttcaccgccgagccgttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatttgcctggcgctgtaccaccagacgccgcgc
ctcaacgtcacgccgagccagaatgaactgatgacccgccacaccgccgaatcgctggcg
gaggtcgaattcgaggtcaagggcgtcggctatcgcgccttctggagccagcgccgcgcc
aagaatgcgccggacggcaatctgcaggcgccgaaggtcgaattggcgcgccgcgaggac
ggcaagatcctggcggacaaggtgcgcgacaagctggagcttaccgcaaccatcaccggg
ctggactttggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgccttc
ctcaatgccgatgccaacgatcgcgccgaactgctggaagagctgaccggcaccgaaatc
tatgggcgactgtccgaacaggtgttcgagtcgcacaagcaggccaaaaccgacctggat
gggttacaccaacgcgccagcggcatcgaactgctgaacgacgagcagcgccagtctctg
accgaacagctgacggcgctgagcgcgcaggaaatcgccctcggcgagcaaacccagcga
cagcaacaggcgctgagctggctgcagcaatggcaacgcctccggcaacagcaaggcgag
ggtcaacggcggctggaaaccgcccagcgcgagcaggcggaggccgccccgcagctgcag
cagctggcgctcagcgaaccggccgagaaattgcggccgctgcgcggcgaacgcgatcgc
tgccgcgccgaactgcagacgatacaacagcaggcagcccagctgacgcagcaacaggaa
cagcactcggcgcagctggcgccgctgcagcaggcggtggaaaaagcccgcctggcgcag
caaacccatgccgagcatatgcggcaacagcaacagctgatcgatgagcaagtcgctccg
ctcgaccaccaaatagcccaactgcagtcgacacaggccgagcgacgacaggccgccgat
gccaccacgcagcagtgcgcccagcagcaaactacgctggagcagctcaccgctcagcgc
agccagctgacggcacagggcgcactacatcagcagcagttgaacgcgctgaacgaagcg
ctggccgttcaacaacagcagcaacaggcgctggaggcgcaaacgccgttggccccgctt
cgccaacgcctgagcgccctggcggatctgcgcccaacacgccagcagctgtttactctg
gcgtcccttaaccgtcagacccgcgagcgtctggctaggcaacaggcggagcacgccgag
cggcaaacgcagctcgccgggctgcaacagcagttggagagcgcgcgtcagcaattcaaa
cagcacaaggcgcagctgcaggaagtggagcagatccacgaactggaaaaacgcatcgtc
agtctggaagcggagcgcgccctgctgcaaagcggtgccccctgcccactgtgcggttcc
accagccatccagcagtagagcagtatcaggctgtacagccttcggccacggaacagcgt
ttggttgagatgcgtactctcaccgagaaactgcaaacccagggcaccgagttgcgcacc
cgctgcgaaggcctgcaggaacagcaacaacgccagcagcaaaccatcgcgcaggatgaa
cagcagttggctgcccaacagcagcagtggcagcagctcagcgcaccgctggcgttcgac
tttacgctggcggagagcgagcgactcagcgcctggctgagcggttgcgacgatgaagag
cggcgcgggcagcacgcgctgcagcagcatgaacaggcggcgcaggcagtacaacaggca
aaagacgcgctcgccgctctgcaaacgcagcagcagcaggcgcagcaacagctggcgctg
ctcgaagagcgctttacgctgctgcagaaaacctatgccgacagcctgcaacagcagcaa
gacctgcaacaacgctggcaggaaggcgaaaaaaccctcgcagagcggcgcgcgcagcgg
ctggcgctgttcggcgaacagcgggtcgccgaggtacgggaacagctgcgcgccaaacaa
accgccagtgaacaggccagcttacaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgagcgcctgaccggccagcaggccgggttacaacaacaacacaccctgatgcaggag
cggctgcagcaggcgcagcagcagtggcagcaggcgctggccgacagcgaattcgctgat
gaaaccgccttcaccgccgcgctgctggacgacacactgcgccgcgaattgcagcagcgt
agagagcaactgcaacagcggcaggtagaggccgcggccctgctgacgcaggcgacgcaa
acgctggagcagcatcggctgaaccgccctgagggggtggatgaagccaacacggatctc
gacgcgctcacccaatcgctggccgagttggcacagcagttgaaaacgttgcagctgcgc
cagggtgaactgcgcaaccagttggaaagcgacgccgcccgtcgccttaatcagcaggcg
ctgttcgagcagatcgcccgcagtcagcaagactacgacgactggagctacctcaaccag
ctgatcggctcgaaagaaggcgacaagttccgccgcttcgctcaggggttaacgctcgat
catctggtctatctggctaaccagcaactcggccggctgcatgggcgctacctgctgcag
cgcaaaaccagcgatgcgctggagctgcaggtggtggacacctggcaggcggacgcgctg
cgcgatacccgcaccctgtccggcggtgagagcttcctggtcagcctggcgctggcgctg
gcgttgtccgatctggtcagccacaaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctagacgccgaaaccctcgataccgcgctggacgcgctggacagcctgaat
gcctccggcaaaaccatcggcgtgatcagccacgtcgaggcgatgaaagaacgtattccg
gtgcagatcaaggtgaaaaaggtcaacgggctcggcgtcagccggctggaggcgcatttc
aggctggaatga
DBGET
integrated database retrieval system
