Serratia sp. NGAS9: GUC32_04890
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Entry
GUC32_04890 CDS
T10949
Symbol
smdB
Name
(GenBank) multidrug efflux ABC transporter permease/ATP-binding subunit SmdB
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sern Serratia sp. NGAS9
Pathway
sern02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GUC32_04890 (smdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sern02000
]
GUC32_04890 (smdB)
Transporters [BR:
sern02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GUC32_04890 (smdB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
nSTAND3
AAA_29
RsgA_GTPase
MMR_HSR1
Mg_chelatase
DEAD
Dynamin_N
AAA_33
AAA_23
NB-ARC
AAA_25
DUF87
DUF8611
Motif
Other DBs
NCBI-ProteinID:
QHI76947
LinkDB
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Position
1041880..1043658
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AA seq
592 aa
AA seq
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MNKVQKLWPTLKRLLAYGSPYRKPLGLAVLMLWIAAAAEVAGPILVSYFIDNYVAKGQLP
LMIVGGLAAAYILLELLAAALHYFQALLFNQAAVGVVQRLRTDVMDAALRQPLSAFDTQP
VGQLISRVTNDTEVIKDLYVMVVSTVLKSAALIGAMLVAMFSLDWRMALVAICIFPAVFV
VMGIYQYYSTPIVRRVRSYLADINDGFNEVINGMGVIQQFRQQVRFGERMSAASQSHYLA
RMQTLRLDGFLLRPLLSLFSALVLCGLLMLFGFSGEGVIGVGVLYAFINYLGRLNEPLIE
LTSQQSILQQAVVAGERIFELMDRSQQSYGADDRPLAGGRIDITDLSFAYRADKKVLQHI
SLAVPSRGFVALVGHTGSGKSTLANLLMGYYPVSEGEVRLDGRPISSLSHRTLRQGVAMV
QQDPVVIADSVLANVTLGRNIEEDAVWRALETVQLASLVRGFPQGIHTRLGEQGNNLSVG
QKQLLAMARVLVQAPQILILDEATANIDSGTEQAIQRALRAIREHTTLVVIAHRLSTIVD
ADSILVLHRGQAVEQGNHQQLLAQQGRYYQMYQLQLAGEQLAEAVREESQPA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtgcaaaagctgtggccgacgctgaagcggctgctggcctacggctcgccg
taccgcaaaccgctggggctggcggtgctgatgctgtggatagcggcggcggcggaagtc
gccgggccgatcctggtcagctattttatcgataattacgtcgccaaagggcaactgccg
ctgatgattgtcggcgggctggcggcggcctacattctgctggagctgctggcggcggcg
ctgcactacttccaggcgctgttgttcaaccaggcggcggtgggcgtggtgcagcggttg
cgtaccgacgtgatggacgccgcgctgcgccaaccgctcagcgcctttgacacacaaccg
gtcgggcaattgatctcgcgcgttaccaacgacaccgaagtgatcaaggatctgtacgtg
atggtggtctccacggtgctgaaaagcgccgcgttgatcggcgccatgctggtggcgatg
ttcagcctcgactggcgcatggcgctggtggctatctgcatcttcccggcggtgttcgtg
gtgatgggcatctatcaatactacagcacgccgattgtgcgccgggtgcgcagttatctg
gcggacatcaacgacggtttcaacgaagtgatcaacggcatgggcgtgattcagcagttc
cgccagcaggtgcgcttcggcgagcgcatgagcgccgccagccagtcgcattatcttgcg
cgcatgcagaccctgcggctcgacggttttctgctgcggccgctgctcagcctgttttcg
gcgctggtgctgtgcggcctgttgatgctgttcggcttcagcggcgagggcgtgattggc
gtcggcgtcctctacgccttcatcaactacctggggcgtctgaatgaaccgctgatcgag
ctgacgtcacagcagtcgatcctgcagcaggcggtggtggccggcgaacgcattttcgag
ctgatggatcgcagccagcagagttacggtgccgacgatcgtcctctggccggtggccgc
atcgacatcaccgatctgagcttcgcttaccgtgcggacaaaaaggtgctgcagcatatt
tcgctggcggtgccctcacgcggcttcgtggcgctggtcgggcataccggcagcggcaag
agcaccttggccaacttgctgatgggctattacccggtcagcgagggggaagtgcgtctc
gatggacgcccgatatccagcctgtcgcaccgcacgctgcgtcagggtgtagcgatggtg
cagcaggatccggtggtgatcgccgattcggtactggccaacgtcacgttggggcgtaac
atcgaggaagacgccgtttggcgggcgctggaaacggtgcagttggcgagtctggtgcgc
ggcttcccgcagggtatccacacccgcctgggggagcagggcaataacctgtcggtcggg
cagaaacagctgctggcgatggcgcgggtcttggtgcaggcgccgcagattttgattctc
gacgaggcgactgccaatatcgactcgggcaccgaacaggcgatccagcgggcgctgcgt
gcgatccgcgagcacaccacgctggtggtgatcgcccaccggctgtcgaccatcgtcgat
gccgactccatcctggtgctgcatcgcggccaggcagtggagcagggcaaccatcaacag
ctgctggcgcagcaggggcgctactaccagatgtatcagctgcagctggcgggcgagcag
ttggcggaagcggtgcgcgaggagagtcaacccgcctga
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