Serratia sp. NGAS9: GUC32_06480
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Entry
GUC32_06480 CDS
T10949
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sern Serratia sp. NGAS9
Pathway
sern00300
Lysine biosynthesis
sern00470
D-Amino acid metabolism
sern01100
Metabolic pathways
sern01110
Biosynthesis of secondary metabolites
sern01120
Microbial metabolism in diverse environments
sern01230
Biosynthesis of amino acids
Module
sern_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GUC32_06480 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GUC32_06480 (dapF)
Enzymes [BR:
sern01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GUC32_06480 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QHI77233
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Position
complement(1356073..1356987)
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AA seq
304 aa
AA seq
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MTPLLFHKYHGLGNDYLVCHRSVADRLSQEQIRLLCHPHYGIGSDGLLIDSGDAVNPTLR
IINPDGSEAEKSGNGLRIYARYLFDSERVGHQPFLVHTAGGDVRCQVAEDAHQITVEMGR
ANFSPAALPALIDLPEALNYPLPLKEETLSVSLVSMGNPHCVVPVEKLDLAQVHRLGPLI
ERHPLFPKRTNVQLVEVVDRQTLRIGIWERGAGFTLASGSSSCAAASVMRKLGRVGDRVS
VRMPGGELQIAFSGDFQVSMRGPVHKIATLTLDEDCFAGGAGLFTGSTPAAGTTDNPTAP
AAQS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgactcccctgctgtttcacaaatatcacggcctgggcaacgactacctggtctgccac
cgttcggtcgccgatcgtctgagccaggaacagatccgcctgttgtgccacccgcattac
ggcatcggttccgacggcctgctgatcgacagtggtgacgccgtcaatcccaccctgcgc
atcatcaacccggacggctccgaagcggagaaaagcggcaacggcctgcgtatctacgcg
cgctatctgtttgacagcgagcgcgtagggcatcagccgtttctggtgcacaccgccggc
ggcgacgtgcgttgccaggtggcggaagacgcgcatcagataaccgtggagatggggcgc
gccaatttcagcccggcggcgctgccggccttgatcgatctgccggaggcgctgaactat
ccgctgcccctgaaggaggagacgttaagtgtttcgctggtgtcgatgggcaacccgcac
tgcgtggtgccggtggaaaaactggatctggcgcaggtgcatcggctcggaccgctgatt
gaacgccatccgctgttcccgaaacgcaccaatgtacaactggtggaagtggtcgatcgc
cagacgctgcgcatcggcatctgggagcgcggcgccggctttaccctcgcctccggcagc
agcagctgcgccgccgccagcgtgatgcgcaagttgggacgagtcggcgatcgggttagc
gtgcggatgccgggcggcgaactgcagatcgccttcagcggcgattttcaggtcagcatg
cgcgggccggtgcacaaaatcgccaccctgacgctggacgaagattgttttgccggcggt
gcggggctgtttacgggatccaccccagcagccggaaccacagataatccaacggcacca
gcagcgcaaagctga
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