Serratia sp. NGAS9: GUC32_09240
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Entry
GUC32_09240 CDS
T10949
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sern Serratia sp. NGAS9
Pathway
sern03018
RNA degradation
Brite
Enzymes [BR:
sern01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GUC32_09240
Messenger RNA biogenesis [BR:
sern03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GUC32_09240
Ribosome biogenesis [BR:
sern03009
]
Prokaryotic type
rRNA processing factors
GUC32_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QHI77746
UniProt:
A0AAX1G6E9
LinkDB
All DBs
Position
complement(1923811..1927191)
Genome browser
AA seq
1126 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPSNYSSHGRPNIKDVLREGQEVIVQVDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALSSLQLPDGMGLIVRTAGVGKSADAL
QWDLSFRLKHWEAIKKAAEGRPAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKILDLA
KEHIAALGRPDFSSKIKLYSGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVE
NRLRDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCNGTGTIRDNESLA
LSILRLIEEEALKENTKEVHAIVPVQVASYLLNEKRESVSAIEKRQGGVKAVIVPNDEMQ
TPHYSVLRVRKGEETSTLSYLLPKLHEEDMERPLEDAPMERKRPEQPALASFSLSADVPP
PAEEPVAVAKPVAAAAKAKAAAPAAAKPGFLGRLFGGLKNLFAGEEQPAVEEAKPAETPK
AEGNGENRRQDRRGQRRQGTGRKERGERSDRGDRPERSERKERGEGRDNRERDNREPREN
REGRESRESRDEQRRNRRNQQQNAPVAEETASEEGAKAPREDQQQRREQRAERQRRRQEE
KRQAQQEVKALESVDAVESTDEEQEERQQQNMQRRQRRPLSQKVRILSAEEELQRAAEEL
LAPKAPVAKAEDAQPTADDSVKLLPETVAAQPEDDAQGESRGNGEGMPRRSRRSPRHLRV
SGQRRRRYRDERYPLQSPMPLAGAFASPEMASGKVWVSYPVAQVEEAEVQTEAVEQAPVV
AAAVEQHSVTVEDTQTTASVNEPAPEAAVETASVTVTEEAAVVAPVVATPAEEIPAPVET
APATVAVEQPKVEETAPAVEAEPVAETVAVEPVVEPAPTEDEPVVEVAPVVEATPAEETP
VVEAAPAAASVEVAPVEKAPAPIAAEPAPAVAQQPAPVKAVQNALYKHIATAPMTKAPAP
AYVPEERKHSNWQRPSFNFEGKGSAGGHSAVSQATAPATKPQPVNE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttgattaacgcaactcagcaggaagagttgcgtgttgccctcgtagat
ggacagcggctgtatgatttggatatcgaaagtccgggtcatgagcagaaaaaagcgaat
atttacaaaggcaaaatcacccgcattgaaccaagtcttgaagcagcgttcgtggactac
ggcgcagaacgacatggttttctccctcttaaagaaatcgcccgcgaatacttccctagc
aattactcttcccatggccgcccgaacatcaaagatgtgctgcgcgaaggccaggaagtc
atcgttcaggtagacaaagaagaacgtggcaacaaaggcgccgccttgaccaccttcatc
agcctggcgggcagctatctggtgctgatgccgaacaacccgcgcgccggcggtatttct
cgccgcatcgagggtgacgatcgtaccgagctgaaagaagcgctctcttcgctgcaactg
ccagacggcatgggcctgatcgttcgcaccgcgggcgtaggcaaatccgccgacgcgctg
cagtgggatctctccttccgtctgaagcactgggaagcgattaaaaaagccgccgaaggc
cgccctgcaccgttcctgatccaccaggaaagcaacgttatcgtgcgtgccttccgcgat
tatctgcgcccggacatcggcgaaatcctgatcgacaacccgaaaattctcgatctggcc
aaagagcacatcgctgcgctgggccgcccggatttcagcagcaaaatcaaactgtacagc
ggtgaaattcctctgttcagccactatcagatcgaatcgcagatcgaatccgccttccag
cgcgaagtgcgcctgccgtccggcggctcgatcgtcatcgacagcaccgaagcgctgacc
gccatcgacatcaactccgcacgcgcaacccgcggcggcgacatcgaagagacggcgttc
aacaccaacctggaagcggcggacgagatcgctcgccagctgcgcctgcgcgacctcggc
ggcctgatcgtcatcgacttcatcgacatgacgccggtacgccaccagcgcgaagtggaa
aaccgcttgcgcgacgccgtgcgtcaagaccgcgcgcgcatccaaatcggccgcatctcc
cgcttcggcctgctggaaatgtcacgccagcgcctcagcccgtcgctgggtgagtccagc
caccacgtgtgcccacgctgtaacggcaccggtaccatccgagacaacgaatcgctggcg
ctgtccatcctgcgcctgatcgaagaagaagcgctgaaggaaaacaccaaagaagttcac
gctatcgtgccggttcaggtcgcttcgtacctgctgaacgaaaagcgcgaatccgtcagc
gcgatcgaaaaacgtcagggtggcgtgaaagccgtcatcgtgccgaacgatgaaatgcaa
accccgcactactcggtgctgcgcgtgcgcaagggcgaggaaacctctaccctcagctac
ctgctgccgaaactgcacgaagaagacatggagcgtccgctggaagatgcgccgatggaa
cgcaagcgtccggagcaaccggccctggcttccttctccctgtccgccgatgtgccgccg
ccggctgaagaacccgtcgccgttgccaaacctgtcgctgcagccgccaaggctaaagcc
gcagcgccggccgccgctaaaccgggcttcctgggccgcctgttcggtggtctgaagaac
ttgttcgccggtgaagaacaacctgccgtcgaagaagccaaaccggccgaaacgccgaag
gcggaaggcaacggtgagaaccgtcgtcaggatcgtcgcggtcagcgccgtcaaggcacc
ggccgtaaagagcgcggtgagcgtagcgaccgtggcgatcgcccggaacgcagcgagcgt
aaagagcgcggtgaaggccgtgacaatcgcgagcgcgataaccgtgaaccgcgtgagaac
cgtgaaggccgtgaatcgcgtgaatcccgcgatgaacagcgccgtaaccgccgcaaccag
cagcagaacgcgccggtagcggaggaaaccgcttcggaagaaggtgctaaagcgccgcgc
gaagatcagcagcaacgccgtgagcagcgtgctgaacgccagcgtcgtcgtcaggaagag
aaacgtcaggctcagcaggaagtgaaagcgctggaaagcgttgacgcagtcgagagtacc
gacgaagagcaggaagagcgccagcagcagaacatgcagcgccgtcagcgccgccctctg
tcgcagaaagtgcgtatcctgtctgcggaagaagagctgcagcgtgcagcggaagagctg
ttggcgccgaaagcgccggtagcgaaagccgaagacgcgcagccgaccgccgacgacagc
gtcaagctgttgccggaaaccgttgccgcacagccggaagacgatgcccagggcgaaagc
cgcggcaacggcgaaggcatgccgcgtcgttcccgtcgttcaccgcgtcacctgcgcgtc
agcggccagcgtcgccgtcgttaccgcgatgagcgttacccgctgcaatccccaatgccg
ttggcgggcgcgttcgcttcgccggaaatggcatcaggcaaagtatgggtaagctacccg
gtcgctcaggttgaagaagccgaagtgcaaaccgaagccgtagagcaggcgccggttgtc
gccgcagcggttgaacagcacagcgttaccgtggaagacactcagaccacggccagcgtc
aacgaaccggcacccgaagccgccgttgagactgctagcgttaccgtaacggaagaagct
gcagtcgtagcaccggttgtagccactccggccgaggaaatcccggcgccggtggaaacc
gccccggcaactgttgcagttgaacagccgaaagtggaagagactgcccctgcagtggaa
gccgagccggtagctgaaaccgtagctgtagagccagtggttgaacctgcgccaacggaa
gacgagcctgtggtcgaagttgcaccggtggtagaagccacgccagcggaagaaacgcca
gtggtagaagccgcacctgcggcagcctccgtggaagttgctccggtcgaaaaagcccca
gcgccaatcgccgcagaacctgcacctgcagttgcgcagcagccggcgccggtgaaagcc
gtgcagaacgcgctgtacaaacacatcgccactgcgccgatgactaaagcgcctgcgcca
gcctacgtgccggaagaacgcaagcacagcaactggcagcgcccttccttcaactttgaa
ggcaaaggttcagccggtggtcactcggcagtgagccaggccaccgcgcctgccacaaag
ccgcagccggttaacgaataa
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