Serratia sp. NGAS9: GUC32_19585
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Entry
GUC32_19585 CDS
T10949
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sern Serratia sp. NGAS9
Pathway
sern03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GUC32_19585 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sern03400
]
GUC32_19585 (recD)
Enzymes [BR:
sern01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GUC32_19585 (recD)
DNA repair and recombination proteins [BR:
sern03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GUC32_19585 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
AAA_22
UvrD-helicase
SH3_13
PhoH
SLFN-g3_helicase
nSTAND3
AAA_16
UvrD_C
AAA_28
CbiA
T2SSE
ABC_tran
SRP54
TrwB_AAD_bind
FtsK_SpoIIIE
Mg_chelatase
NPHP3_N
AAA
NTPase_1
DEAD
MukB
ATPase
Motif
Other DBs
NCBI-ProteinID:
QHI79660
UniProt:
A0AAX1GBG7
LinkDB
All DBs
Position
complement(4124012..4125862)
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AA seq
616 aa
AA seq
DB search
MIALLEQAVALGALRPLDVQFARVVANEDEPDILLAAACLSAEAGAGHVCLMLEQLQADT
LFEGRQPALALALWEAVGRPDSARWQQRLAASAAVGDGSGATPLVLHGPRLYLQRMWQNE
GEVAAFIGGEGESLAVPEEALRAILDRLFGTASDEPDWQKIAAAVAATRRIAVISGGPGT
GKTTTVAKLLAALVQLDEGERLRIQLAAPTGKAAARLTESLGSASRQLALTPAQQALFPT
EAATLHRLLGAQPNSQRMRYHRGNRLHLDVLVVDEASMVDLPMMARLIAALPDRARVIFL
GDRDQLASVEAGAVLGDICRFAEQGYSDARAAELSRLTGCSIEGRQADAEAAVRDSLCLL
RKSYRFDARSGIGQLALAVNAGAGDRALAALNGSFGDVAGYALATSEEYQALLDACVAGY
RDYLRLTAEGADAATVLAAFGRFQVLCALREGPFGVAGLNERIELGLQRAGLIDRKPGVL
GRWYRGRPVMIGRNDSALGLFNGDIGITLPDEHGDLRVHFQLPDGSIKSVQPSRLPAHET
AYAMTVHKSQGSEFDHTVLVLPNHFLPVLTRELVYTAITRARKQLSLYATETVLLRAIRT
PTQRRSGLAERLQATE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcactgctggagcaggcggtggcgcttggcgcgctgcgcccgctagacgtgcag
ttcgcccgcgtggtggcgaacgaagacgagcctgatattttgctggccgccgcctgcctg
agcgcagaggcgggggcgggtcatgtctgcctgatgctggagcagctgcaggcggacacg
ctgtttgaagggcgccaaccggcgctggcgttggcgctgtgggaggccgtcgggcgaccg
gatagcgcgcgttggcagcagcgtttggcggccagtgcggcggtcggggatggcagcggc
gcaacgccgctggtactgcacgggccgcgtttatacctgcagcgcatgtggcaaaacgaa
ggtgaagtagcggcgtttatcggcggcgaaggtgaatcgctggcggtgccggaggaggcg
ttgcgcgccattctcgaccgcttgttcggcacggcgagtgacgaacccgactggcagaag
atcgccgccgcggtggcggctacgcggcgtatcgcggtaatttccggcggaccgggtacc
ggtaaaaccaccaccgtcgccaagctgttggcggcgctggtgcagctggatgaaggcgaa
cgcttgcgcatccagctggcggcgccgaccggcaaggcagcggcgcgcctgacggagtcg
cttggcagcgccagccgtcaactggcattgaccccggcgcagcaggcgttgttcccgacg
gaggcggcgacgttgcaccgtctgttgggagcgcaaccgaacagtcagcgcatgcgctat
caccgtggcaaccggctgcatttggatgtgctggtggtggatgaggcttcgatggtcgat
ctgccgatgatggcgcgcctgattgccgcgctgcccgatcgggcgcgggtgattttcctt
ggcgaccgcgatcagctggcttcggtagaggccggcgcggtgctgggggatatttgccgt
tttgccgagcagggatacagcgatgcgcgtgccgcagagctgagccgcctgaccggctgt
tcgatcgaagggcggcaggccgacgcggaagcggcggtgcgcgatagcctgtgtctgctg
cgcaagagctatcgcttcgatgcacgttccggcatcggccagctggcgttggcggtcaac
gccggcgcgggggatcgcgcactggcggcactaaacggcagtttcggcgatgtcgcgggc
tatgcgctggcgacgagcgaagagtatcaggcgctgttggatgcctgcgtggcgggctac
cgcgactatctgcggctgaccgccgaaggggcggacgcggcgacggtgctggcggctttt
ggccgtttccaggtgctgtgtgcgctgcgtgaagggccgttcggcgtcgccggcctgaac
gagcgcattgagctcgggctgcagcgtgcgggcctgatcgaccgcaaaccgggcgtgctt
ggccgctggtaccgggggcggccggtgatgatcggccgcaacgacagcgcactggggctg
ttcaatggggatatcggcattacattgccggatgagcacggcgatctgcgcgtgcatttc
caactgcccgacggcagtatcaagtcggtacagccaagccgtttgccggcgcatgaaacc
gcttatgccatgacggtgcacaaatcacagggatcggagtttgaccatacggttctggtg
ttgccgaaccatttcctgccggtgctgacgcgtgagctggtctataccgcgatcactcgt
gcgcgtaagcagctctcactgtacgctacggagacggtactgctgcgggctattcgcacg
ccgacccagcgccgcagcggattggctgaacggttgcaggcaacggaataa
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