Serratia sp. NGAS9: GUC32_20515
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Entry
GUC32_20515 CDS
T10949
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sern Serratia sp. NGAS9
Pathway
sern03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUC32_20515 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sern03019
]
GUC32_20515 (pcnB)
Enzymes [BR:
sern01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GUC32_20515 (pcnB)
Messenger RNA biogenesis [BR:
sern03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GUC32_20515 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QHI80732
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All DBs
Position
4328300..4329847
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AA seq
515 aa
AA seq
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MFTRVANFCRKVLTRDDKLPRDDAAAGDKNVVREERAAAPSRPAPQPRAADNGSNAPARR
STPRKRPPFPIAESNDSMTVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRD
LLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQNQ
ESDKNSSQQAQNGMLLRDNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVGGLNDLKQG
VIRLIGDPETRYREDPVRMLRAVRFAAKLDMRISEETAEPIPRLASLLHEIPPARLFEES
LKLLQAGYGFQTYLKLCEYQLFQPLFPLIARNFTPNHDTPMERILAQVLKNTDHRLQNDM
RVNPAFLFAAMLWYPLLEHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLV
RDIWQLQLRLSRRQGKRAHKLMEHPKFRAAYDLLALRAEVEDNQDMLRLAEWWGEFQDAT
PARQKAMLSTLGDDPAPRRARQRRPRRRAPRKEGA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtagccaacttctgtcgtaaggtactgacccgcgatgacaagctgccc
cgcgacgacgcggcggccggcgataaaaacgtagtccgcgaagagcgtgccgcggcgcca
agccgccctgcgccgcagccgcgcgccgccgataacggcagcaacgcccctgcccgccgc
tcaacgccgcgcaagcgtccgccttttcctatcgccgagagcaacgactcgatgaccgtg
atcccgcgcgaacagcactcgatctcccgtaaagacatcagcgaaaatgcgctgaaagtg
ctttatcgcctgaacaagtccggctacgaggcctatctggtcggcggcggggtgcgcgat
ctgttgctcggcaaaaagccgaaagacttcgacatcaccaccaacgccacgccggagcaa
gtgcgcaagctgttccgcaactgccgcctggtcggccgccgtttccgcttggcgcacgtg
atgttcgggccggagatcatcgaagtggccaccttccgcggtcaccacgaacagaatcag
gaatccgacaagaactcgtctcagcaggcgcaaaacggcatgctgctgcgcgacaacatc
ttcggttcgatcgaggaggacgcccagcgccgtgatttcaccatcaacagcctgtactac
ggcgtggcggatttcaccctgcgcgattacgtcggcggcctgaacgatctgaagcaaggc
gtgatccgcctgattggcgatccagaaacccgctaccgcgaagatccggtgcgcatgctg
cgcgcggtgcgcttcgccgccaagctggatatgcgcatcagcgaagagaccgccgagccg
atcccgcgcctggcctcgctgctgcacgagatcccgccggcgcgcctgttcgaagaatcc
ctcaagctgctgcaggcgggttacggtttccagacctacctgaagctgtgcgaataccag
ctgttccaaccgctgttcccgctgatcgcccgcaacttcacgccgaaccacgatacgccg
atggagcgcattctggcgcaggtgctgaagaacaccgatcaccgtctgcagaacgacatg
cgcgtcaacccagccttcctgtttgccgccatgctgtggtacccgctgctggagcacgcg
cagaagctggcgcaggaaagcggcctggcgtactacgacgccttcgcgctggcgatgaac
gacgtactcgacgagcagtgccgctcgctggcgatcccgaaacgcatcaccacgctggtg
cgcgatatctggcagctgcagctgcgcctgtcccgccgtcagggcaaacgcgcgcacaaa
ctgatggaacatccgaaattccgcgccgcctatgatttgctggcgctgcgtgcggaagtg
gaagacaatcaggatatgctgcgtctggccgagtggtggggtgagttccaagacgccacg
ccggcgcggcagaaagccatgctgagcaccctgggtgacgatccggcgccgcgccgcgcg
cgtcaacgccgtcctcgtcgccgggcaccgcgtaaagaaggggcataa
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