Prodigiosinella confusarubida ATCC 39006: CWC46_00870
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Entry
CWC46_00870 CDS
T05968
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
serq03000
]
CWC46_00870
03036 Chromosome and associated proteins [BR:
serq03036
]
CWC46_00870
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_00870
Transcription factors [BR:
serq03000
]
Prokaryotic type
Helix-turn-helix
Other families
CWC46_00870
Chromosome and associated proteins [BR:
serq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CWC46_00870
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CWC46_00870
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
DUF3333
Phage_NinH
INT1_R3
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AUG98503
UniProt:
A0A2I5TE27
LinkDB
All DBs
Position
191283..191579
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AA seq
98 aa
AA seq
DB search
MFEQRVNSDVLTVSTVNSQAQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgtgaattctgacgtactgactgtttccaccgtaaactctcaggct
caggtaacccaaaaacccctgcgcgactcggttaaacaggcactgaagaactattttgct
caattaaacggtcaggatgtcaatgacctgtatgagctggtactggctgaagttgaacag
ccactgttggacatggtgatgcaatacacccgcggcaaccagacccgcgcggccctgatg
atgggcatcaaccgtggaacattgcgtaagaaattgaaaaaatacggcatgaactga
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