Prodigiosinella confusarubida ATCC 39006: CWC46_00965
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Entry
CWC46_00965 CDS
T05968
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00071
Fatty acid degradation
serq00280
Valine, leucine and isoleucine degradation
serq00310
Lysine degradation
serq00362
Benzoate degradation
serq00380
Tryptophan metabolism
serq00410
beta-Alanine metabolism
serq00640
Propanoate metabolism
serq00650
Butanoate metabolism
serq00907
Pinene, camphor and geraniol degradation
serq00930
Caprolactam degradation
serq01100
Metabolic pathways
serq01110
Biosynthesis of secondary metabolites
serq01120
Microbial metabolism in diverse environments
serq01200
Carbon metabolism
serq01212
Fatty acid metabolism
Module
serq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CWC46_00965
00650 Butanoate metabolism
CWC46_00965
09103 Lipid metabolism
00071 Fatty acid degradation
CWC46_00965
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CWC46_00965
00310 Lysine degradation
CWC46_00965
00380 Tryptophan metabolism
CWC46_00965
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CWC46_00965
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CWC46_00965
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CWC46_00965
00930 Caprolactam degradation
CWC46_00965
Enzymes [BR:
serq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CWC46_00965
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CWC46_00965
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CWC46_00965
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CWC46_00965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
HTH_32
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AUG98515
UniProt:
A0A2I5TE41
LinkDB
All DBs
Position
210685..212874
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGENLYVNWLEDSIAELVFSATGSVNKLDIQTVSSLGAALDILALQHDLKGLVLRSD
KPTFIVGADITEFLSLFAAPKEKLHQWLTDANDIFSRLEDLPVPTISAIKGYALGGGCEC
VLATDFRIATADIRIGLPEVKLGIMPGFGGTVRLPRLLGADSALDIIAAGKDIGAEAALK
VGLVDAVVADDKLVAAALFMLHQAIEGKLNWRAYRAPKLVPLKLGKVEAAMSFATTKAMV
MQTAGKHYPAPITAVKTIEAAAGLSRDAALRIETENFVALTQTDAARTLVGVFLNDQYVK
GKAKKQVGSTSAPKEAAVVGAGIMGGGIAYQSALKGVPILMKDINETALTLGMNEAAKLL
NKQLERGKLNGVKMAGIFSSIHPTLNYIGFEHADVVVEAVVENPKVKASVLAETESHVHE
DTVIVSNTSTIPIVKLAQALKRPQNFCGMHFFNPVHRMPLVEIIRGPQTDEKTISRVIAY
ALHMGKTPIVVNDCPGFFVNRVLFPYLAAFSLLMRDGADFREIDNVMERQFGWPMGPAYL
LDVVGIDTAHHAQSVMAEGFPSRMDKNYRDVIDVLFEHQRFGQKNGVGFYRYQTDNKGKP
HKESDENIDELLATVCQARRRFSAEEIVSRLMIPMINEVALCLEENVIASPAEADMALIY
GLGFPAFHGGACRYFDTLGSARYLEMAQPLSHMGPLYQIPESVRQKARNKEGYYPTVVPH
ADISHRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggcgaaaacctctacgttaactggcttgaagatagcattgctgagctg
gtgttttctgcgacagggtcagttaataaactggatatacagacagtcagtagcctcggt
gctgctctggatatactggcactacagcatgatctaaaaggtttggtactgcgttcggat
aaacccacatttattgtcggggcagatattaccgaattcctctctttatttgcggcccct
aaagaaaaactgcatcaatggctgacggatgcaaatgacattttcagccgtctggaagat
ttgccagtaccgacgatttctgccatcaaaggttatgctctgggtggcggctgcgaatgc
gtgctggcaaccgatttccgcattgccactgcggatatacgaatcggcttaccggaagtg
aagttggggatcatgcccggctttggcggtacggttcgactgcctcgtttgctgggtgcg
gatagcgcactggacattatcgccgcaggtaaagatatcggtgctgaagcggcactgaaa
gttggcctggttgatgccgtcgtcgcagacgataaactggttgcggcggcgttattcatg
ttgcatcaggcaattgaaggaaagttgaactggcgtgcttatcgcgcgcccaaactggta
ccgctaaaactcggtaaagttgaggccgccatgagttttgctacgaccaaagccatggtg
atgcaaaccgctgggaaacattatcccgccccgatcactgcggtaaaaaccattgaagcg
gcagcgggtttgtcccgtgatgccgccctgcgcattgaaacagagaattttgtcgccctc
acacaaactgatgcagcccgtactctggtgggagtatttctgaatgatcagtatgttaag
ggaaaagcgaaaaaacaggtggggagtacttccgcccccaaagaggccgccgtcgtaggt
gcagggatcatgggtggcggtatcgcctaccagtcggcattaaaaggcgttcccatcctg
atgaaagatattaatgaaaccgcgctgacactcggtatgaacgaggcggccaaactactg
aataagcaactggaacgcggaaagctcaatggcgtaaaaatggcgggtattttttccagc
attcatcccacattaaattacatcggttttgaacatgctgatgtggtcgtcgaagccgtg
gtagaaaatcccaaagtgaaagccagcgtattggctgaaactgaatcccacgtccatgaa
gatacagttatcgtgtccaacacttcgaccattccgattgtgaaactggcccaggcactg
aagcgaccacagaacttctgcggtatgcatttttttaatccggttcaccggatgccgttg
gtagaaatcattcgtggtccgcaaactgacgaaaaaaccatttcccgtgttatcgcctat
gcgctccacatggggaaaacccctatcgtggtaaatgattgcccgggatttttcgttaac
cgtgtcctgtttccttaccttgctgctttcagtttgctgatgcgtgatggcgcggatttt
cgtgaaattgacaacgtgatggaacgacagtttggctggccaatggggccggcatacctg
ctggatgtcgtgggaatcgatacggcccatcatgctcaatctgttatggcagaaggcttt
ccctcacgtatggacaaaaattaccgcgacgttattgacgtgttatttgaacatcagcgg
tttggtcaaaaaaatggggtgggtttttatcgttatcagaccgacaacaagggtaaacca
cataaagaatccgatgagaacattgatgagctgctggccacagtttgtcaggcacgtcgt
cggttcagtgccgaagagatcgtctcccgcctgatgatcccgatgattaacgaagtggcg
ctctgcctggaagaaaacgtgatcgccagtccggctgaagcggatatggcgctgatctac
ggcctgggatttcctgcgttccacggtggagcctgccgctatttcgacaccctgggcagc
gcgcgttatctggagatggctcagccactgtcacacatggggccgctctatcaaattcct
gaaagtgtgcggcaaaaagccagaaataaagaaggttattatccgactgtcgtgcctcac
gccgacatctcccatcgtcaaccagcataa
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