Prodigiosinella confusarubida ATCC 39006: CWC46_03570
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Entry
CWC46_03570 CDS
T05968
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CWC46_03570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_03570
Enzymes [BR:
serq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWC46_03570
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CWC46_03570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
TrwB_AAD_bind
AAA_30
Zn_ribbon_6
AAA_19
ArfA
Motif
Other DBs
NCBI-ProteinID:
AUH02394
UniProt:
A0A2I5TCV3
LinkDB
All DBs
Position
complement(771672..773867)
Genome browser
AA seq
731 aa
AA seq
DB search
MPVVQVALPVPLARTFDYRLPEGLCPVPGMRVSVPFGNRKMIGIVTTLNNSSELPLDQLK
VVREVLDDEPLFPASLWRILLWAVDYYHYPIGEVLFHALPIILRQGKPAHTAPLWQWFAT
EQGRAMPLASLKRAPKQQQALAALLHAPLYRHQVGESALTETALQALRSKSLCDLRPLSR
QLSDWRSEFSIIGERLKLNTEQATAVGAIRSEDNHFSAWLLAGITGSGKTEVYLSVLENI
LAQGKQALILVPEIGLTPQTIARFKDRFTAPVEALHSGLNDSERLAVWLRAKSGEAAIVI
GTRSALFTPFARLGLIVIDEEHDGSYKQQEGWRYHARDLAVFRAREEDIPIVMGSATPAL
ETLYNVQIGKYRQLRLSKRAGNARLAQQHILDLKGLPLTTGLSQPLINRIHHHLNNDNQV
ILFLNRRGFAPVVMCHECGWIAECQRCDHYYTLHQHQQILRCHHCDSQRPVPPQCPHCGS
THLVPVGLGTEQLEQALPALFPQTPITRIDRDTTSRKGSLEQQLAQVRQGGARILIGTQM
LAKGHHFPDVTLVVLLDVDSSLFSADFRAAERFAQLYTQVSGRAGRAGKAGEVILQTHHP
EHPLLQTLLQQGYDDFANQTLKERQSVFLPPFTSHVLFRAEDHDNQQATLFLQQLRNLLE
ASPLRDDALWLMGPVPALQPKRAGRFRWQLLLQHPSRARLQQLLRNSLALIDTLPQTRKV
KWILDVDPTDS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgttcaggtcgccctgcccgtgccgctggcacgtacattcgattatcgatta
cccgaagggttgtgccctgtgccgggtatgcgtgtcagcgtaccctttggcaaccgtaaa
atgattggcattgttaccacactgaacaacagcagcgaactgccgttggatcagctcaag
gtcgtgcgagaagttctggatgacgaaccacttttccctgccagcctgtggcgcattctg
ctgtgggccgtggattattatcattaccccatcggcgaagttctgtttcatgccctgcca
attatactgcgtcagggtaaaccggcccacaccgcaccgctttggcagtggttcgcaaca
gaacaagggcgggcaatgccactggcatcactgaaacgagcccctaaacagcaacaggcg
ctggccgccttactacatgctccactttaccgtcatcaggtcggtgagtcagcactaacc
gaaactgctttacaggcattgcgcagcaaaagcctgtgcgacctgagacccctttcccga
caactctccgactggcgtagcgaattcagcatcatcggtgaacgattaaagctgaatacg
gagcaggccaccgccgtaggcgctatacgcagcgaagacaaccatttttccgcctggtta
ctggcggggattacaggatccggcaaaaccgaagtgtatctcagcgtgctggaaaacata
ctggcgcaaggcaaacaagctctgatactggtgccggaaatcggcctgacgccacaaacc
atcgcccgctttaaagaccgttttactgcaccggtagaagccctgcattccgggctgaat
gacagtgaacgccttgctgtctggttgcgggccaaaagcggcgaagcggcgattgtcatc
ggtactcgctccgcgctgttcacgccatttgcccgactggggctgattgtgatcgatgaa
gaacacgatggctcttataaacagcaggaggggtggcgctatcatgctcgcgatctggcg
gtatttcgtgcccgggaagaagatattcctattgtcatgggttccgccactccggcgctg
gaaaccttatataacgtacagattggcaaatatcgtcagctccgactcagtaaacgcgca
ggtaatgcacgactggcgcaacagcatatactcgatctgaaagggttgccgttgactacc
ggcttgtctcaaccattgatcaaccgcatccatcatcacttgaataatgataatcaggtg
attctgtttttgaaccgacgcggttttgccccagtggtgatgtgtcatgaatgtggttgg
attgccgagtgtcaacgctgcgatcactactatacattgcaccaacatcagcaaatattg
cgttgccatcactgtgacagccaacgtccggtgccaccacagtgtcctcactgcggctct
acgcatctggttcctgtagggctaggcaccgagcagttggagcaggcactacctgccttg
tttccccagactcccattacccgcattgatcgggacaccaccagccgcaaaggttcgctg
gaacaacaactggcacaggtaaggcaaggcggggcacggatactcatcgggacacagatg
ctggccaagggccaccatttcccggatgtcacactggtcgtgctactggatgtagacagt
tcactgttttccgctgattttcgagccgcagaacgcttcgcccagctttatacgcaggta
tccggtcgcgctggtcgcgctggcaaagcaggggaagtgattcttcagactcatcatcca
gaacacccgctattgcagacgttgctgcaacaagggtatgacgactttgctaaccagact
ctgaaagaacgtcagagcgttttcctaccgccgtttaccagccatgtcctgttccgggca
gaggatcatgataatcaacaggccacgctgttcctgcaacaactacgcaatctgctggaa
gccagcccactacgggatgatgccctctggctgatgggacccgttcccgcactgcaaccc
aaacgagcgggtcgctttcgctggcaactactgcttcagcatccatcccgcgctcgtcta
cagcaattgctccgaaattcactggctttgatcgacacacttccacagacgcgaaaggtg
aaatggatactggatgttgacccaacagacagctaa
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