Prodigiosinella confusarubida ATCC 39006: CWC46_03625
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Entry
CWC46_03625 CDS
T05968
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serq03016
]
CWC46_03625 (trmA)
Enzymes [BR:
serq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CWC46_03625 (trmA)
Transfer RNA biogenesis [BR:
serq03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CWC46_03625 (trmA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_11
MTS
Methyltransf_12
Methyltransf_15
Methyltransf_31
DREV
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
AUG98991
UniProt:
A0A2I5T387
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All DBs
Position
complement(784273..785376)
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AA seq
367 aa
AA seq
DB search
MTPEILPIDQYDAQLEEKVGRIKAIMAPFSAPEPVVFRSPVSHYRMRAEFRIWHEGDDLY
HIMFDQQTKQRIRVEQFPAASELINRLMPVLLAALRPQPVLRRKLFQVDYLSTLSGEIVV
SLLYHKVLDDEWQQQASALRDYLRAQGFALQLIGRATKTKICLDRDYIDECLPVAGKQMI
YRQVENSFTQPNAAMNIQMLEWALSVTEGSKGDLLELYCGNGNFSLALARHFERVLATEI
AKPSVAAAQYSIVANQIDNVQIIRMAAEEFTQAMRGVRQFNRLQGIDLSSYRCETIFVDP
PRSGLDDDTVRLAQEYPRILYISCNPDTLCANLETLNQTHQMSRLALFDQFPYTHHMECG
VLLEKRK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagaaatcctgccaatcgatcaatatgatgcccaacttgaagaaaaagtcggg
cgaattaaagcgataatggcacctttcagtgcgccagagcctgtcgttttccgctcgccg
gtcagccattaccggatgcgtgcagaatttcgcatctggcatgaaggagacgacctttac
cacatcatgtttgatcagcaaaccaaacagagaatcagggtggagcaatttccggcggcc
agtgaactgatcaaccgactgatgccggtgttgctggcggcattacgtccgcaaccggta
ctgcgccgtaagttgttccaggtcgattatctttccacattgagtggtgaaatcgtggtg
tcactgctatatcacaaagtgttggatgacgagtggcaacaacaggcctcggccttacgg
gactatctgcgtgcgcaaggtttcgccttacaactcataggacgagcgaccaagacgaaa
atctgtcttgatcgcgattatatagacgagtgcctgccagttgccggtaaacagatgatt
tatcgacaggtggaaaatagctttacccagcccaatgcggcgatgaacattcaaatgctg
gaatgggcgctgtcagtcacggaaggatctaagggtgatttactggagctgtactgcggc
aatggtaacttttcactggcactagctcgtcattttgaacgcgtattggcaacggaaatc
gctaaaccatcggtggccgcggctcaatacagtattgtcgccaaccagattgataatgtg
cagattatccgtatggcagcagaagaatttacccaggcaatgcgaggtgtccgccagttt
aatcgtctgcagggtatcgatctttccagctatcgttgtgaaacgatatttgttgatcca
ccacgcagtggcttggatgatgacacagtacgactggcacaggagtatccgcgtattctt
tatatctcctgcaatccagacacactgtgtgccaatcttgaaaccctaaaccaaacccat
cagatgagtcgattggcactgtttgatcagttcccttatacacatcatatggaatgtggt
gtattgctggaaaaacgcaaataa
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