Prodigiosinella confusarubida ATCC 39006: CWC46_04330
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Entry
CWC46_04330 CDS
T05968
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00040
Pentose and glucuronate interconversions
serq01100
Metabolic pathways
serq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CWC46_04330
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWC46_04330
Enzymes [BR:
serq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CWC46_04330
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AUG99111
UniProt:
A0A2I5T3L2
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Position
complement(946761..947894)
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AA seq
377 aa
AA seq
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MKALLKPITAGLLLALCQPVFAASTATGGYATTAGGNVTGAVSKTAASMQDIIDIIAAAR
YDSAGKKVSTGAYPLIITYTGNEDSLINAAAANICGQWSKDARGVEVKNFTKGLTIIGAN
GSSANFGIWIVKSSDVVVQNMRMGYMPGGASDGDAIRVDASPNVWIDHNEIFAQNHECDG
TPDGDTTFESAVDIKKASTYVTVSYNYIHGIKKVGLDGSSSSDTGRSITYHHNIYSDVNA
RLPLQRGGLVHAYNNLYTGITSSGLNVRQNGNALIESNWFENAVNPVTSRYDGSNFGKWD
LRNNNITKPADFTTYNITWTADTKAYVNADDWTTTEAYPSSIPYSYSPVSAQCVKNKLAN
YAGVSKNLATLTSSACN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattactgaaacctataactgcggggctgttgttagcattatgccaacccgtc
tttgccgcaagtacagcaaccggtggttatgccaccaccgctggcggtaacgttaccggt
gcagtcagtaaaacggcagcatccatgcaagatattatcgatatcattgctgccgcccga
tacgactccgctggcaagaaagtctcaaccggtgcctatccgctgatcatcacctacacc
ggtaacgaagactcgctgatcaatgctgctgccgccaatatctgcggtcagtggagcaaa
gatgcccgcggtgtagaagtcaagaatttcaccaagggtctgaccatcattggtgccaat
ggttcttctgccaacttcgggatttggatcgtcaaatcttctgacgtggtggtacagaac
atgcgtatgggctatatgccgggcggagccagtgatggtgatgcgatccgcgtggatgcc
tcacccaatgtctggattgatcacaatgaaattttcgctcaaaaccatgaatgtgacggc
acgcctgatggagacaccacgtttgaatccgcggtagatatcaagaaagcgtctacttat
gtcaccgtttcctataattatattcatggtatcaagaaagtcggtcttgatggctccagt
tccagcgataccggccgtagcatcacctatcaccacaatatttacagcgatgtgaatgca
cgtttgccactgcaacgtggtggcctggtacatgcctataacaacctgtacaccggcatt
accagttcgggtctgaacgtgcgtcaaaatggtaatgcgctgatcgaaagcaactggttt
gaaaatgcagtgaacccggtaacgtcccgttatgatggctccaatttcggtaagtgggat
ctacgtaacaacaacattaccaaacctgccgacttcactacctacaacattacctggact
gccgataccaaagcttatgtaaatgcggacgactggactaccacggaggcctacccatcc
agcattccttacagctatagcccggtcagcgcccagtgcgtgaaaaacaaactggctaac
tatgccggtgtcagtaagaacctggcaaccttgaccagttcagcctgtaactaa
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