Prodigiosinella confusarubida ATCC 39006: CWC46_05235
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Entry
CWC46_05235 CDS
T05968
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serq02000
]
CWC46_05235
Transporters [BR:
serq02000
]
Other transporters
Pores ion channels [TC:
1
]
CWC46_05235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AUG99270
UniProt:
A0A2I5TG97
LinkDB
All DBs
Position
complement(1118183..1121491)
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AA seq
1102 aa
AA seq
DB search
MRLILIFLLGCLLSTASLAAKIPTDAQLRQDLQQAESNKSLPNQADIIKELQSALRMLNE
SKEAQQRAAQYQNVIDDFPKLTRQLHQQLTAEDNKSPPATHNLSINDLEQQIVQTSSQLL
ERSRLLQQEQDWLREIIDSLSQLPQQQTEANRALSDIERRIQALGVPNTPLGQAQLAALQ
AESALRKSRVDELALAQLSASNRQELSRLRGELYQKQRDRLDNQLQTQRNTINTLRQQEA
EQALERTELLAEQSGDLPTIIAKPLQINRELSLALNQQAQRMDLISSQQRQAAAQTLQVH
QALSTLREQAQWLGSSTALGETLRAQVARLPDMPKPQLLDRDMAQLRVQRLHYDDLLSQL
PKTELARQDNGSPLTTAQQKILDDQLRTQRELLTSLISGCDTLVLELTKLKVANNQLEDA
LLEIREAAHRYLFWVADVEPITFAYPITLLKDLSLLLSLDTLTQLGRAMIMMVTSRDTLL
PLLGALLLVGFSVGSRRHYHAFMQRASDRVGKVTLDHFMLTLRTVFWSVMVAIPLPVLWA
ALGYGLQNAWPYPVAVAIGDSVTATVPLMWVVMISAAFAHRQGLFIVHFGWSPIRVARAM
RYYQLSIGFIVPLIMALITFDNLNDREFSSTLGRLCFILLCMALTLVTTSLKRAGIPLYL
DKAGSGENPANRGMWNILIFMPLVAALAASLGYLTTSQALLARLETSVAIWFFLLVVYHI
IRRWMLIQRRRIAFDRARQRRAEILAQRARGEEESLSSSGYDIGGDTLEEPVVDLDAISA
KSLKLVRSILTLIALVSVIALWSEIHSAFAFLGNISLWDVTSTVKGVESVQPITLGAVLI
AMLIFFITVQLMRNLPALLELALLQHIELAPGTGYAITTVSKYLLMLIGGLIGFSMIGIE
WAKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIHDLTGCVMRINTRA
TTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVVSVPAPAQANSQEVTELLLEVAKQ
SDLVLDNPPPEVFLVDLTQGIQIFELRIFAAEMGHRMPLRHQLHQLILESYRQHNLVIPF
PPFQVQMDSVQMSGRTSTTGGV
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgatactgattttcttactgggatgcctgttatcaaccgcatcgctagccgcc
aaaatccccaccgacgcgcaactgcgtcaggatttgcaacaggcggaaagtaataaaagc
ctgcctaatcaggcagacataattaaagaactacaatccgccctgcgtatgctcaatgaa
agcaaggaagcacaacaacgggccgcgcagtaccagaacgtgattgatgatttcccgaaa
ctgacccggcaactacatcagcaactgactgccgaggacaacaaatcgcctcctgccacg
cataacctttcgattaacgatcttgaacagcagattgtacaaaccagcagccagttgctg
gagcggagccgcctactacagcaagagcaggattggctacgggaaatcatcgattcactg
tcccaactgccacagcaacaaaccgaagccaaccgtgcactaagtgatattgagcgacga
attcaggcgctgggtgtgccgaataccccgctcggacaagcccaactcgccgccctgcag
gcggaatcggcgctgcgtaaaagtcgtgtcgatgagttggcgctggctcagctttccgcc
agcaaccgacaggaactgtcgcgcctgcgtggcgagctttaccagaaacagcgtgatcga
ctggataatcagctgcaaacccagcgcaacacaataaacaccttgcgacagcaggaagcg
gaacaagcactggagcgcacagagctactggcagagcagagtggtgatttacccaccatc
attgccaaaccgttacagattaatcgcgaattgtcgttagcactgaatcagcaggcacag
cgtatggacctgatttcctcacagcaacgtcaggctgcggcacagacgcttcaggtacat
caggcattgagtacattgcgcgaacaggcgcaatggctgggctcttcgaccgccttgggg
gaaacgctgcgcgcccaggtcgctcgcctgcccgacatgccaaagccccagttactggac
agagacatggcccaattgcgtgtgcagcggctgcattatgacgatttgctcagtcaacta
ccaaaaaccgagctggccagacaggataatggctcaccactgaccaccgcgcagcaaaaa
atccttgacgatcagctacgcacgcaacgtgaattactgacctctctgatatctggttgc
gacacactggtccttgaattgaccaagctgaaagtcgccaataatcagttggaagacgcg
ttgttagaaattcgtgaggccgcacaccgttacctgttctgggtggcggacgtcgaaccg
ataaccttcgcctacccaatcacactgctgaaagatttatcattgctgctgtcgctggac
acgctgacccaactcggcagggccatgatcatgatggtcaccagccgcgatacgctgtta
ccgctgctgggcgcattgctgctggtagggttcagtgttggctctcgtcgtcattaccat
gcctttatgcagcgtgccagcgatcgggtgggtaaagtcaccctagaccattttatgctg
actctacgcacggtattctggtcggttatggtggctattccactcccggtattgtgggcc
gcgctgggatatggcttgcagaatgcctggccttatccggtggccgtggctatcggcgac
agtgttactgctaccgtaccactgatgtgggtagtgatgatcagtgcagcgtttgcccat
cggcaggggctgttcatcgtgcactttggctggtccccgatacgggtagctcgggctatg
cgctattaccagctatctatcggttttatcgtccccttgatcatggcgcttatcacgttt
gacaatcttaatgaccgtgaattttccagtacgctggggcgcctgtgttttatcttgttg
tgtatggccctcacgctggtaaccaccagcctcaagcgggctggcattccactctatctg
gataaagccggttccggggaaaatccagccaaccgtggcatgtggaacatcctgattttc
atgccgctagtggctgcgctggccgccagtctgggttatctgacgacatcccaggcgctg
ttggcccggctggaaacgtccgtggccatctggtttttcctgctcgtggtttatcacatc
attcgtcgctggatgctgattcagcgccgtcgcattgcctttgatcgtgccagacaacgt
cgtgccgaaatcctggcccagcgagcgcggggggaagaagaatcgctatcgtccagcggc
tatgacatcggtggcgacacattggaagaaccggtagtagatttggatgctatcagcgcc
aaatcactaaaactggtgcgttcaatcctgacacttatcgcgctggtttcggtgattgcg
ttgtggtcagaaatccattccgcctttgcgtttctgggaaatatcagtctatgggatgtc
accagtaccgtgaaaggggtggaaagcgtgcaaccaattacccttggtgcagtgctgatt
gccatgctgatttttttcatcaccgtacagttgatgcgaaacttacccgccttgctggaa
ctggcgctgttacagcatatcgagctcgcacccggcaccggttatgccatcaccacagtc
agtaaatacctgctgatgctaataggtggtttgatcgggttctcgatgattggcattgag
tgggcgaaactacagtggttggtcgctgcgttgggcgtgggattgggctttggcttgcag
gagattttcgccaactttatttctggcctgattattctgttcgaaaagccgattcgtatt
ggcgataccgtcacgatccacgatctcactggctgtgtcatgcggattaacacccgggcc
acgaccatttcagactgggaccgtaaagagatcattgttcccaacaaagcgtttattacc
gaacagtttatcaactggtcgctgtccgattccgtgacccgcgtggtggtaagtgttccg
gccccggcgcaggccaatagccaggaagtgacggaactattgctggaggtggcaaaacag
agtgatctggttctggataatccgccgccggaagtttttctggtggatctgacacagggt
atccagattttcgagctacgcatttttgccgctgaaatggggcaccggatgccgttgcgt
catcagctacatcaattgattctggaaagttaccgccaacacaatctggtcataccgttc
ccaccctttcaggtgcagatggattcggtgcagatgtctggacgcacatccactaccggt
ggcgtttaa
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