Prodigiosinella confusarubida ATCC 39006: CWC46_05250
Help
Entry
CWC46_05250 CDS
T05968
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CWC46_05250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serq03019
]
CWC46_05250
03009 Ribosome biogenesis [BR:
serq03009
]
CWC46_05250
Messenger RNA biogenesis [BR:
serq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CWC46_05250
Ribosome biogenesis [BR:
serq03009
]
Eukaryotic type
Pre-60S particles
RNases
CWC46_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AUG99273
UniProt:
A0A2I5TG93
LinkDB
All DBs
Position
1123712..1124254
Genome browser
AA seq
180 aa
AA seq
DB search
MVDENRLIWIDLEMTGLDPERDHIIEIATLVTDANLNVLAEGPTLAVHQPDSQLALMDDW
NVRTHTGSGLVERVKASQFSERAAELETLKFLQQWVPAGKSPICGNSVGQDRRFLFRYMP
ELEAYFHYRYLDVSTLKELAIRWKPEILTGFTKRNTHQALDDIRESVAELAYYREHFIQL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgaaaacagactgatctggatcgatcttgaaatgacgggactggatcccgag
cgtgaccacatcattgaaatcgccacgctggtgaccgatgccaatctgaatgtgctggcg
gaagggccaacactggcggtacatcaaccagatagccaactggcgttgatggatgactgg
aatgttcgtactcatactggcagcggactggttgagcgggtgaaggccagccagtttagt
gaacgcgccgctgagctggaaacgttgaaatttctgcaacagtgggtcccggcaggaaaa
tcaccaatttgtggcaacagcgtcggacaggatcgtcgttttttattccgctatatgcct
gagctggaagcctattttcactatcggtatctggatgtcagcacgctgaaagagttggcg
atccgctggaagccggaaattctaaccggattcacgaagcgtaatacgcatcaggcgttg
gatgatattcgtgagtcggtggctgagctggcctactatcgtgagcattttatccagctc
tga
DBGET
integrated database retrieval system
