Prodigiosinella confusarubida ATCC 39006: CWC46_05320
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Entry
CWC46_05320 CDS
T05968
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00010
Glycolysis / Gluconeogenesis
serq00020
Citrate cycle (TCA cycle)
serq00620
Pyruvate metabolism
serq00650
Butanoate metabolism
serq00720
Other carbon fixation pathways
serq01100
Metabolic pathways
serq01110
Biosynthesis of secondary metabolites
serq01120
Microbial metabolism in diverse environments
serq01200
Carbon metabolism
serq01210
2-Oxocarboxylic acid metabolism
Module
serq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CWC46_05320 (nifJ)
00020 Citrate cycle (TCA cycle)
CWC46_05320 (nifJ)
00620 Pyruvate metabolism
CWC46_05320 (nifJ)
00650 Butanoate metabolism
CWC46_05320 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
CWC46_05320 (nifJ)
Enzymes [BR:
serq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
CWC46_05320 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
TPP_enzyme_C
Fer4_9
Fer4
Fer4_16
Fer4_8
Fer4_10
Fer4_6
Fer4_21
Fer4_17
Fer4_2
LdpA_Fe-S-bd
Fer4_22
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
AUG99285
UniProt:
A0A2I5T404
LinkDB
All DBs
Position
complement(1138165..1141674)
Genome browser
AA seq
1169 aa
AA seq
DB search
MARKMKTMDGNAAAAYVSYAFTEVAAIYPITPSTPMAENVDEWAAQGKQNLFGQPVKMVE
MQSEAGAAGAVHGALQAGALTTTYTASQGLLLMIPNIYKIAGELLPAVFHVSARALATNS
LNIFGDQQDVMAVRQTGCAMLAESSVQQVMDLAAVAHLAAIKGRIPFINFFDGFRTSHEI
QKIELLEYDELGKLLDWQAVDQFRRNALHPDHPVVRGTAQNPDIYFQERESSNRFYDALP
EVVEHYMAEITRLTGREYHLFNYYGAPDADRLIVAMGSVCETIQETVDYLNRRGEKVGLL
TVHLYRPFSLVHFFKYIPATVTRIAVLDRTKEPGALAEPLYLDVKNAFYNHEQRPLIVGG
RYALGGKDIFPSQIVSVFDNLKRVEPKDGFTVGIIDDVTYTSLPYPAEDIDTALPGTTAC
KFWGLGSDGTVGANKSAIKIIGDQTTMYAQAYFSYDSKKSGGITVSHLRFGQQPITSPYL
IQKADFISCSQQSYVNKYDLLAGLKPGGTFLLNCTLEPAELEEKLPVAMKRYLANNAIRF
YLVNAVQIARQLGLGGRFNMIMQAAFFKLADIIPAATAADYLKGAVAKSYGNKGQKVVEM
NNAAIDQGMLAPVQFNVPDHWKTLDEETVAKRAVPDFIQQILEPMNRQEGDLLPVSAFSN
MEDGTFPVGTSAFEKRGIAINVPQWQSDGCTQCNQCAFICPHAAIRPALLSEEEWQTAPA
GLTTKPATGAKTLHYHLAISPLDCSGCGNCVDICPSKGKALTMQPLASQQHQIALWEHAL
TLSPKANPFKKTTVKGSQFEQPLLEFSGACAGCGETPYARLITQLFGDRMLIANATGCSS
IWGASAPSIPYTTNHKGQGPAWANSLFEDNAEFGLGMLLGSNAIRQQVASDVTAALSLPL
SEALRRSLHLWLELKDHSEGTQERTEQLSTLLEKEKSDDPLLNKIYQNRDYLTKRSQWIF
GGDGWAYDIGYGGLDHVLASGEDINVLVFDTEVYSNTGGQSSKSTPAAAMAKFAAEGKRT
RKKDLGMMAMSYDYVYVAQIAMGADKDQTLRAIAEAEAYPGPSLIIAYAACINHGLRAGM
GCSQRETKRAVDAGYWNLYRFNPLRQSAGKNPFMLDSEEPEEDFQEFLQGEVRYSSLKRQ
YPDIADQLFNKTEQDAKERLARYQRLADG
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaaatgaaaacgatggatggcaacgccgcggcagcctatgtgtcctatgcc
tttaccgaggtcgccgccatctatcccatcacgccgtccaccccaatggctgaaaatgtg
gatgaatgggccgcgcaagggaaacaaaatctgttcggccaaccggtaaaaatggtggaa
atgcagtcggaagccggtgctgctggggcagtacacggtgctttacaagccggcgcgctc
accactacctataccgcgtcacaagggttgctgttgatgatccccaacatctacaaaatc
gccggggaattactgccggcggtatttcacgtcagcgcccgcgcgctggctaccaactcg
ctgaatatttttggcgaccagcaggatgtgatggcggtacgacaaaccggctgcgccatg
ctggcggaaagtagcgtacagcaggtgatggatctggctgcggtagcacatctggccgcc
atcaaagggcgcatcccgtttatcaatttcttcgatggtttcagaacgtcccatgaaatc
cagaagattgagctactggagtatgacgagctggggaaattgcttgattggcaggcggtt
gatcagttcagaagaaacgctctacatccggatcatccggtggtcagaggaacggcacaa
aacccggatatctattttcaggaacgggaatctagcaaccggttttacgacgccctacca
gaagtggtggaacactatatggccgaaatcacccggctgaccggcagagagtatcatctg
ttcaattattacggcgcacccgatgccgaccgtttaattgtcgcgatgggatcggtgtgt
gaaaccattcaggaaaccgtcgattacctcaatcggcgcggtgaaaaagtcggcttgctg
acagtccatctctaccgccccttttccctggtgcatttttttaaatacattcccgctacc
gtcacccgcatcgccgtactggatcgcaccaaagagcccggtgccctggccgagccgttg
tatctggatgtgaagaacgcgttctataaccatgagcaacggccattgatcgttggtgga
cgctacgcactgggcgggaaagatattttcccatcacagatcgtttcggttttcgacaac
ctcaaacgggtcgagcccaaagatggtttcactgtcggtatcatagacgacgttacctat
acgtccctgccttatcctgccgaggatattgataccgcgctgccgggtaccaccgcctgt
aaattctggggactgggatccgacggtacggtcggggccaataaaagcgcgataaaaatc
atcggcgatcaaaccaccatgtatgcgcaagcctatttctcctacgattccaagaaatca
ggcggcattaccgtttcacatctgcgtttcggtcagcagccgatcacctcaccctatctg
attcagaaagcagattttatttcctgttcgcagcaatcctacgtcaacaaatatgatctg
ttggcgggattaaaaccgggtggcacctttttgctgaactgcacgctggaaccggcggag
ctggaagaaaaattgccggtggccatgaaacgttacctcgccaataacgccattcgattt
tacctggtcaacgcggtacagattgcccgacagctggggttgggaggccgctttaatatg
atcatgcaagccgccttctttaaactggctgatattattccggcggcgacggcggcagat
tacctgaaaggcgcagtggccaaatcctacggcaataaaggtcagaaagtggtggaaatg
aataacgccgctatcgatcagggaatgctggcacccgtacagttcaatgttcccgatcac
tggaaaaccctggacgaagaaaccgtggcaaaacgcgccgtacctgattttattcagcag
attctggaaccaatgaaccgtcaggagggcgatctgctgccggtcagtgcttttagcaat
atggaagacggcaccttcccggtcgggacatccgcatttgagaaacgaggcattgccatc
aatgtgccgcaatggcagtccgatggttgtacccagtgtaaccaatgtgcgtttatctgc
ccgcatgctgctatccgcccggcattattgagtgaggaggagtggcaaacggcccccgcc
ggactcaccacgaaaccagcgactggcgccaaaaccctgcattatcatctcgctatttca
ccactggattgctctggctgtggcaactgtgtggatatctgcccgtcgaaaggtaaagcg
ttgactatgcaaccgctggcgtcgcaacagcatcagattgcactgtgggaacacgcgctc
acattgtcacccaaagccaacccattcaaaaagacgacggtaaaaggcagtcagtttgaa
caacccctgctggagttttccggtgcctgtgccggatgtggcgaaaccccctatgcccgc
ctgatcacccaattattcggcgacagaatgctgattgccaacgccaccggatgttcgtct
atctggggagcgagcgccccgtccattccctataccaccaaccacaagggacaaggccca
gcctgggcaaactcgctgtttgaagataacgcggaattcgggttaggcatgctgctcggc
agtaacgctatccgacaacaggttgccagtgatgtcaccgccgccctaagcctgccactc
agcgaagcgctcagacggtcccttcatctgtggttggaactgaaagaccatagtgaaggc
acgcaggagcgtactgaacagctgtccacactgctggaaaaagagaaaagcgacgatccg
ctgctcaataaaatctatcagaaccgcgattacctgaccaaacgctcacaatggattttt
ggcggcgacggttgggcttatgacatcggctacggcggactggaccatgtgctggcttcc
ggtgaagatatcaatgtgctggtgtttgataccgaagtctattccaataccggcggtcaa
tcgtccaaatccacgcccgccgccgccatggcaaaattcgcggcggaggggaaaagaacc
cgtaaaaaagatctgggcatgatggccatgagctacgactacgtttacgtggcgcaaatt
gcgatgggcgcagacaaagaccaaacactgcgagccattgctgaagccgaagcctatccc
ggcccatcgttgatcattgcttacgcggcctgtatcaatcacggcttgcgggcgggtatg
ggatgcagccagagagaaaccaaacgcgcggttgacgctggctactggaatttgtaccgc
tttaatccgctgcgtcagtccgcgggcaaaaatccctttatgctggactcggaagaacca
gaagaggactttcaggaattcctgcaaggggaagtgcgctactcctcgctaaaacggcaa
tatcctgacatcgccgaccagttatttaacaaaaccgagcaggatgccaaagaacgactg
gctcgctatcagcggctggcggacggttaa
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