Prodigiosinella confusarubida ATCC 39006: CWC46_05415
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Entry
CWC46_05415 CDS
T05968
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CWC46_05415 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
serq03000
]
CWC46_05415 (nifA)
Transcription factors [BR:
serq03000
]
Prokaryotic type
Helix-turn-helix
Other families
CWC46_05415 (nifA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
GAF
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_3
HTH_23
AAA_16
GPP34
Parvo_NS1
bpMoxR
TIP49
Motif
Other DBs
NCBI-ProteinID:
AUG99301
UniProt:
A0A2I5TGD0
LinkDB
All DBs
Position
1160186..1161757
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AA seq
523 aa
AA seq
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MTHLPDTGKVVWRFDLSQQFTAVQRISVALSRTTEVGKALQAVLRILHDDAFMQHGMICL
FDKQRGALVIEALHRADEHVVASSSQIRYRPGEGLVGTVMSQRQPLVLKRVADDQRFLDR
LSIYDYDLPFICVPIPGLDQEPIGVLAAQPMALYEDRLPASTRFLETVANLTSQTVRLMQ
PVRRDNDGPVVSSPSPACKVSRPFGFENMVGKSPAMRQTIDIIRQVSKWDTTVLVRGESG
TGKELIANAIHYNSPRASAPFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELA
DGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETIKVDVRIIAATNRKLEEEVRAG
NFREDLYYRLNVMPVSLPPLRERQEDIIELAHFLVRKIATHQGRQLRISDGAIRLLMSYS
WPGNVRELENCLERAAVMTETGLIDRDVILFNHHDSAPLLPKSSAPIPTDESWLDQSLDE
RQRLIAALEKTGWVQAKAARLLGMTPRQVAYRIQIMDINMHRL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacacatctccctgatacgggcaaagtggtatggcgttttgacttgtctcagcagttt
actgctgtgcaacgtatcagtgtggcattgagccgcaccacggaagttggtaaagcacta
caggcggtactgcggatactgcatgatgatgcatttatgcaacatggcatgatttgtctg
tttgacaaacagcgtggtgcgctggtgatcgaagcattacatcgcgcggatgagcatgtg
gtcgccagcagcagccagatacgctatcgcccgggagaagggctggtgggaaccgtgatg
agtcagcggcagccactggtgctaaagcgcgtggcagacgatcagcgttttctcgatcgt
ttgagtatctatgactatgacttgccttttatctgtgtcccgatccctggactggatcag
gaacctatcggcgtactggcggcgcagccgatggcactgtatgaggatcgcttaccagcc
agtacccgttttctggaaacggtggcgaatctgacgtctcagacggtacggttgatgcag
ccagtgcgtcgggataatgacggcccggtggtatcatcgccgtcgcccgcctgtaaagtg
tctcggccgtttggctttgaaaatatggtggggaaaagcccagccatgcgccagacgata
gacattattcgccaggtgtccaaatgggataccacggtgttggtgcggggagagagtggt
accggtaaagaactgatcgccaatgctattcactataattccccgcgtgcctccgcaccg
tttgtaaaattcaattgtgcggcactgccggataacttgctggaaagcgagctgttcggc
catgaaaaaggggcgtttaccggcgcagtgcgtcagcgtaaagggcgttttgaactggcg
gatggtggcacgctgtttctggatgaaattggcgaaagcagtgcgtcatttcaggccaaa
ctgctgcgtattttgcaggaaggtgaaatggagcgggtcgggggcgatgaaaccatcaag
gtggatgtgcggatcatcgccgctaccaaccgcaaactggaagaggaagtccgggccggt
aattttcgtgaagacctctattaccggttgaatgtcatgccggtgtcgctaccgccgctg
cgtgaacgccaggaggatatcattgagctggcccatttcctggtgcggaaaatcgccact
catcaggggcggcaattgcgtatcagcgacggcgctatccgtctgctgatgagctacagt
tggccgggcaacgtgcgggaactggaaaattgtctggaaagggcggcggtgatgacggag
accgggctgattgaccgggatgtgattctgttcaatcaccatgactctgcgccgttactc
ccaaaatcctcggcccccatcccgacggatgaaagctggctggatcaaagtctggatgaa
cgtcagcgattgattgccgctctggaaaaaactggctgggtacaggctaaagcagctcgt
ttactggggatgacgccgcgtcaggtggcctaccgcattcagatcatggatatcaacatg
catcgtctgtaa
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