Prodigiosinella confusarubida ATCC 39006: CWC46_07715
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Entry
CWC46_07715 CDS
T05968
Name
(GenBank) hypothetical protein
KO
K10906
exodeoxyribonuclease VIII [EC:3.1.11.-]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_07715
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CWC46_07715
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VIII
Motif
Other DBs
NCBI-ProteinID:
AUG99717
UniProt:
A0A2I5T572
LinkDB
All DBs
Position
complement(1681911..1683596)
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AA seq
561 aa
AA seq
DB search
MNNYAFVIKAKAKSDKKSLFCWFSAKSDSRAEREIANILEDAEIETGRGTDYLLPVRTNW
HVVDDLPDEGVIDDTWCDRYELSEDSLTWKRIPAPPPSVNIHDDHATVAAAQVEHSGAQL
AQDTEQTGTQSEPQQDSAVTFEQATFTQRVLGAWLYSKFTALGPQGLRDIATLQHDMDAA
YPQNLLLALNNAKDLLQLKHCFPKTLFDLIRDIKSVWPVDDKAPDVGHLLTFAKEWINAH
NNQSESSNGPLREDITAKWVAKQGIKRTNAGTNAGGNNQTDRGNDITHSLDLLNKEIAMA
TLPMDFDIYEIPGPILRRAKEIIANKEEPFNTWSQKLLNMPGILDFSRAAIFALIRNAIP
DITKMPASMQPYINSSLTESNHAHPSLELLTLARHLPAITEPGNTTETNNGTDSTLENTK
LGSTDAQPEMKNLGGGMFSIDGLSQKATSNEGEKPENHSEEVGDVQMETNVGQSSEAVTS
LPPATSEHGTVEEAAANLANAMKRCTDAIPSVQKIEPRNISENIPARTDSEHVEKLEARI
ARLEGVLASFAAAFTTAEDTL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactatgcgtttgtcattaaagcgaaagcaaaatcggacaaaaaaagtctgttc
tgctggttctctgcaaaatctgattcacgcgccgagcgcgaaattgccaatattcttgaa
gatgccgaaattgaaactggccgcggtaccgattatctcttgcccgtccgtaccaactgg
cacgttgttgatgacctgccggacgagggtgtcattgatgatacgtggtgcgatcgctac
gagctgagtgaagatagcctgacgtggaagcggatccccgcgccgccgccatcagttaac
attcatgacgaccacgcaaccgtagccgctgcgcaagtggaacattctggcgcgcaacta
gcacaggatacagagcagaccggcacgcaatcggagccgcagcaagacagcgccgttaca
tttgaacaggctacgtttactcagcgagttcttggcgcgtggctatatagtaaattcacg
gctctcgggccgcaaggcctgcgcgatattgctacgttgcagcacgatatggacgcagca
tacccacaaaacctgctgctggcgctgaacaatgcaaaagacttgctacagctcaagcac
tgcttccctaaaacgcttttcgatctgattcgtgacatcaaaagtgtttggccggtggac
gacaaggcgccggacgtcggccacttgctgacgtttgcaaaagaatggattaacgcacac
aacaatcagtccgaatcatctaatggtccgttacgtgaagatattaccgcgaagtgggtc
gcaaaacagggcataaaacgcactaatgcaggcacgaacgcaggtggtaacaatcaaact
gatcgcggcaatgacatcacgcactctcttgatttgctgaataaagaaatagcgatggcc
accctgccgatggattttgatatctatgaaatacccggccccatactccgccgggccaaa
gagattattgctaacaaagaagagccatttaatacgtggagccaaaagttactcaacatg
cccggtattctggatttttcccgtgccgcgattttcgcgttaattcgcaatgcgatccca
gacatcaccaagatgcccgcatcaatgcagccgtatatcaattccagcctcacagagtca
aaccacgcacacccctcactggaattattaacgctagcacgtcacctgcccgccatcact
gaaccgggcaacaccaccgaaaccaataatggcaccgattcaacgttggaaaataccaaa
ctaggcagcactgacgctcagccagaaatgaaaaaccttggcggcggcatgttctctatt
gatggattgtctcagaaagccacctcaaatgagggagaaaaaccggaaaatcattccgag
gaggttggtgatgtgcagatggaaacgaatgtcggtcagtcgagcgaagctgttacttcg
ttaccaccagcaacgagcgaacatggcacggttgaagaagcggccgcaaatctggcgaat
gcgatgaagcgctgtactgatgctatcccgtcagtacaaaaaatcgaaccacgaaatatt
tcagaaaatattcctgccaggactgatagcgaacacgtcgaaaaactcgaggcccgtata
gctcgtctggagggggttctggcgtcatttgctgctgcgtttacaactgcggaggacacg
ctgtga
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