Prodigiosinella confusarubida ATCC 39006: CWC46_08520
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Entry
CWC46_08520 CDS
T05968
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq03030
DNA replication
serq03430
Mismatch repair
serq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWC46_08520
03430 Mismatch repair
CWC46_08520
03440 Homologous recombination
CWC46_08520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serq03032
]
CWC46_08520
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_08520
Enzymes [BR:
serq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWC46_08520
DNA replication proteins [BR:
serq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWC46_08520
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWC46_08520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AUG99848
UniProt:
A0A2I5THY2
LinkDB
All DBs
Position
1836455..1837192
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AA seq
245 aa
AA seq
DB search
MSTVITRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRHFHVYTRPDRLVDP
EAYNIHGISDEFLANKPSYADVTDDFLAFIRGAELVIHNAMFDIGFMDYEFRMLNRNIPK
TETFCKITDSLLMARKLFPGKRNNLDALCDRYLIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSLSFSMEGESQRQGDDASEAIQRIARPTSSLSVVYANAEELQAHEKRLDLIVKKGGS
CLWRN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtaattacgcgacaaatcgttctggatactgaaaccacgggtatgaacaaa
ctgggggttcactatgaaggacatcgtattatcgagatcggggcggtagaggtgattaac
cggcgtcttaccgggcgtcactttcatgtctacacccggcctgatcgtttggtcgatccg
gaagcctataacattcatggcattagtgatgagttcctggcaaataaacccagttatgcc
gatgtcactgatgattttctggcgtttatccgcggagctgagctggtcattcataatgcg
atgtttgatatcggttttatggattatgaattccgcatgttgaaccgcaatattcccaaa
acagaaacgttttgtaagattactgatagcctgttgatggcgcgcaagctattccccggc
aagcgcaataatctggatgccttatgtgaccgttatctgatagataacagtaaacgaacg
ctgcatggcgcattactcgatgccgaaattctggctgaagtttatctggccatgacgggt
ggacaaacgtcgttgtcgttttcaatggaaggagaaagtcaacgacaaggggatgatgca
agcgaagccatccagagaatcgcaagacctacgtcgtcgttaagcgtggtttatgccaat
gcggaagagctgcaggcgcatgaaaaacgattggatttgattgtgaaaaaaggtggcagc
tgtttgtggcggaattaa
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