Prodigiosinella confusarubida ATCC 39006: CWC46_08625
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Entry
CWC46_08625 CDS
T05968
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWC46_08625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serq03019
]
CWC46_08625
Enzymes [BR:
serq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CWC46_08625
Messenger RNA biogenesis [BR:
serq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CWC46_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
HD
Gad2
TOR1L1_N
Motif
Other DBs
NCBI-ProteinID:
AUG99865
UniProt:
A0A2I5THZ5
LinkDB
All DBs
Position
complement(1851422..1852879)
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AA seq
485 aa
AA seq
DB search
MISRYFYCTVNSSSLSRCIIFTRVANFCRKVLNRENEMAESGTEPQPLTVIPRDQHTISR
RDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDITTNATPEQVRKLFRNCRL
VGRRFRLAHVMFGSEVIEVATFRGHHEQNGEPQIKNAAQRDQNGMLLRDNIFGTIEEDAQ
RRDFSINSLYYSISDFTVRDYTNGMSDLRQGIIRMIGEPETRYREDPVRMLRAVRFAAKL
NMKLSPETAEPIPRLAALLHDIPSARMFEESLKLLQAGYGYPTYVMLCQYQLFQPLFPLI
SSHFTEEGQTNLERMIIQVLKNTDQRIQNDMRVNPAFLFSAMLWYPLIEHAQKLTQESGL
AYFEAFALAMNDVLDEQCRSLSIPKRITSLIRDIWQLQLRLSRRQGKRAYKLMEHPKFRA
AYDLLALRADIEHHPELQRLTQWWGEFQVAPPPRQQVMLNSLDDGPTPHRRSRRPRKRPA
APGKS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgattagccgctatttttattgtactgttaattcttcatcactatcgaggtgtattatt
tttacccgagtagctaatttttgccgtaaagtactgaatcgtgaaaacgaaatggctgag
tcaggcacagagccccaaccgctgacggtaatcccgcgtgaccagcacactatttcacgc
cgtgacattagtgaaaatgcactgaaggtactttatcgcttgaacaaagcgggctatgag
gcttatctggtcggtggtggtgtacgtgacctgcttctgggtaaaaaacctaaagacttt
gatatcaccaccaatgccacaccagaacaggtacgtaaactattccgtaattgtcggctg
gttggccgccgttttcgtctcgctcatgtgatgtttggatctgaagtgatcgaagtcgct
acgtttcgcggccatcatgaacaaaatggggaaccgcagataaaaaatgccgcgcagcga
gaccagaatggaatgctgctgcgtgacaatattttcggcaccattgaagaagacgctcaa
cggcgtgatttctccatcaatagcctctactacagcatttctgattttacggtacgcgac
tacaccaatggcatgagtgatttacgtcaggggattatccgtatgattggtgaaccggaa
acccgttaccgtgaagatccggtgcgaatgctacgtgctgtgcgttttgccgccaaactg
aacatgaagctcagcccggaaaccgcagaaccgattccacggctggcagcattactgcat
gacattccctcagcacggatgtttgaagagtcactgaaactattgcaagctggctatggt
taccccacttacgtgatgttgtgtcagtaccaactgttccagcctctatttcccctcatc
agcagccatttcaccgaggaaggtcaaaccaatctggaacggatgatcattcaggtactg
aaaaataccgaccaacgcattcagaacgatatgcgcgtcaatcctgcgttcctgttttcc
gccatgttgtggtatccgttgattgaacatgcgcagaaactgacacaagaaagtggcttg
gcttattttgaggcttttgcactggcaatgaatgatgtgctggatgaacagtgtcgttca
ttgtcaatcccgaaacggatcacgtcgttaatccgcgatatctggcaattacagttacga
ctgtcgcgtcgtcaggggaaacgggcttacaagttgatggagcaccctaaattccgtgct
gcctatgatctgctcgctcttcgtgctgacattgagcatcacccggaattacaacgtcta
acgcagtggtggggagaatttcaggtagcaccacctccgcgtcagcaagtgatgctcaat
tcactggatgatggcccgacgccgcaccgtcgttcgcgccgcccacgcaaacgacccgct
gctccgggaaaatcctga
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