Prodigiosinella confusarubida ATCC 39006: CWC46_10205
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Entry
CWC46_10205 CDS
T05968
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00071
Fatty acid degradation
serq00280
Valine, leucine and isoleucine degradation
serq00310
Lysine degradation
serq00362
Benzoate degradation
serq00380
Tryptophan metabolism
serq00410
beta-Alanine metabolism
serq00640
Propanoate metabolism
serq00650
Butanoate metabolism
serq00907
Pinene, camphor and geraniol degradation
serq00930
Caprolactam degradation
serq01100
Metabolic pathways
serq01110
Biosynthesis of secondary metabolites
serq01120
Microbial metabolism in diverse environments
serq01200
Carbon metabolism
serq01212
Fatty acid metabolism
Module
serq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CWC46_10205
00650 Butanoate metabolism
CWC46_10205
09103 Lipid metabolism
00071 Fatty acid degradation
CWC46_10205
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CWC46_10205
00310 Lysine degradation
CWC46_10205
00380 Tryptophan metabolism
CWC46_10205
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CWC46_10205
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CWC46_10205
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CWC46_10205
00930 Caprolactam degradation
CWC46_10205
Enzymes [BR:
serq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CWC46_10205
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CWC46_10205
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CWC46_10205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
YidB
Motif
Other DBs
NCBI-ProteinID:
AUH00140
UniProt:
A0A2I5T6D0
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All DBs
Position
2195513..2197717
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AA seq
734 aa
AA seq
DB search
MTEQPAIVALEKEKSAFSLTLRPDNIGIITMDVAGEKVNTLKAQFARQIMAVLTQAQQHA
ALRGLIFVSAKADSFIVGADITMLDNCTDAKQAEALARTGQETLAYIAGLPFPVVAAIHG
ACLGGGLELALACDYRVCTTEDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVDKALDLMLT
GKHVRSQQALRLGLVDDAVPYSILLETAEAMIRQGKRTSSPVNWRIGFMHSRLIRSLLFR
VVKQKTQARTQGHYPATGKIIQVVRDGLEKGEAEGYLAEARAFGKLVMSPESIALRGLFF
TATALKKTSEAGGEARVIHRVAVLGGGLMGGGIASVTAIRGGLPVRIKDIQEKGVNRALK
HHWQKLEKQLTHRRITHIEQQRQMSLMTGSTDYRGFEQIDIVIEAVFEDLALKQQMVSEV
EQFASPDTIFASNTSSLPIHQIAAKASRPAQVIGLHYFSPVEKMPLVEVIPHTGTSAETI
ATTVALVKKQGKTAIVVADRAGFYVNRILAPYLDEAARCLLEGEPVDTIDQALVRFGFPV
GPFTLLDEVGIDVAIKIAPILTRELGERFSVPPALKVIASDDRQGRKNARGFYRYGYQRH
IWQRSKKDVDNTVYPLLGVTPKAHLDSALMAQRCVMLLLNEAARCLDEGIIRSAREGDIG
AVLGIGFPPFLGGPFRYIDHLGSDTVVKTLQVLQQQYGDRFAPCRALLSRSESAEPYFYP
SRHSDTSALKSEAG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacagccggcaattgtagcgctggagaaggagaaatcggctttctcgctgacg
ttgcgacccgataacattggtattatcacaatggatgtcgcgggtgaaaaagtgaatacc
ctgaaagcgcaatttgccaggcaaatcatggcggtattaactcaggcgcaacagcatgcc
gctctgcgggggttgatttttgtgtcagccaaagcggattcctttatcgtcggggcagat
atcaccatgttggataattgcactgatgccaaacaggccgaagcgttagccagaacaggg
caggagacactggcgtatatcgccggactgccttttcccgtcgtcgccgccattcatggc
gcttgtctgggcggcggactggagctggcactggcatgcgattatcgggtttgtaccaca
gaggataaaaccgtattgggattgccggaagttcagctaggtttgttacctggttcaggc
ggaacacagcgtttaccccgcttaattggtgttgataaagcgctggatcttatgctgaca
ggaaagcatgttcgcagccaacaggctctcaggctgggcctggtggatgacgccgtacca
tacagtattttgctggagacggccgaggcgatgatacgacaaggcaagagaacatcatcg
ccagtgaattggcgtatcggttttatgcatagtcgtctgatcagatcgttgttgttcagg
gtggttaagcagaaaacacaggccaggacgcagggacattacccggccaccgggaaaatt
attcaagtggtacgcgatggtttggaaaagggtgaagcggaaggatatctggcggaagcg
cgagcgtttggcaagctggtcatgtcaccagagtccatcgctctgcgtggtctgtttttc
accgctacagcactgaaaaaaacgtcggaagccggtggtgaagcgcgggtgatccatcgg
gttgctgtgctgggtggcggtttgatggggggaggtattgccagcgtaacggcgattcga
ggcgggctgccggtaagaatcaaagatatccaggaaaaaggggtaaatcgcgcattaaag
caccattggcagaagcttgaaaaacagctaacccatcgacgcataacgcatatcgagcag
caacggcaaatgagcctgatgactggcagtacggattatcgtggttttgagcagatcgat
attgttattgaagcggtatttgaggatttagccctgaagcaacagatggtgtcagaggtt
gagcaatttgcctcacctgatacgatttttgcttcgaatacgtcctcgttgcctattcat
cagattgccgccaaagccagtcgaccagcacaggttatcggcctgcattatttcagcccg
gtggagaaaatgccgcttgttgaggttattccccacactggtactagcgcggaaactatt
gccactacggtggcattagtaaaaaaacagggaaaaacggctattgttgtcgctgaccgt
gcggggttttacgttaaccggattctggcgccttaccttgatgaagcggcgcgttgcctg
ctggaaggcgagccagtagatactatcgatcaggcgctggttcgcttcggttttccggtc
gggccttttacgctgttggatgaagtgggaattgacgttgcgataaagattgctccgatc
ctgactcgtgagctgggtgaacgtttcagtgtgcctcccgcgctgaaggttattgccagc
gatgatcgtcagggacggaaaaatgcgcgtggtttttaccgttatggttatcagcggcat
atctggcaacggtctaagaaagatgttgataataccgtttatccgttgctcggtgttacc
ccgaaagcgcatttggattcggcattgatggcacagcgttgtgtgatgctgttgctgaac
gaagcagcgcgttgtctggatgaaggcattattcgtagtgcccgcgaaggtgatatcggt
gcggtattgggtattggttttccaccatttctgggaggaccatttcgctacatcgatcat
ttggggagcgatacggtggttaaaacactgcaagtattacaacaacagtatggtgatcgt
tttgcgccttgtcgtgctttgctttcccggagtgaaagcgcggaaccgtatttttatcct
tcaaggcattctgatacgtccgccctgaaatctgaggcagggtaa
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