Prodigiosinella confusarubida ATCC 39006: CWC46_11810
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Entry
CWC46_11810 CDS
T05968
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq03030
DNA replication
serq03430
Mismatch repair
serq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWC46_11810 (holB)
03430 Mismatch repair
CWC46_11810 (holB)
03440 Homologous recombination
CWC46_11810 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serq03032
]
CWC46_11810 (holB)
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_11810 (holB)
Enzymes [BR:
serq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWC46_11810 (holB)
DNA replication proteins [BR:
serq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWC46_11810 (holB)
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWC46_11810 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
DUF6587
KTSC
Motif
Other DBs
NCBI-ProteinID:
AUH00428
UniProt:
A0A2I5TJL6
LinkDB
All DBs
Position
2590525..2591538
Genome browser
AA seq
337 aa
AA seq
DB search
MEWYPWLNTAYRQLLGQYQSGRGHHALLIHALTGMGDASLVYALGRWLLCQHREGIKSCG
KCHSCQLMSAGTHPDWHVLRPEKGKQSLGVDAVRDVLETIYQHARQGGVKLIWLPLAESL
TEAAANALLKTLEEPPMETYFLLGCREPSRLLATFRSRCLYHYLDVPDETYSVQWLSSHY
PMDSQATLTALRLYAGAPLAAAKLLQPEHWKPRQTLCLTLSDCLIQRNFLPLVTPLNHED
VDDRIHWLSALLLDAIKCQHGAEEYLVNQDQLHLVQQLANTLDSDRLHHELRQWLQCRHQ
LRVITGVNRELLLTERLLNWEQNLSVTTLLPSHPFSV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaatggtatccgtggcttaataccgcttatcgtcaactgcttgggcagtatcagtca
ggacgtgggcaccatgcattgctgattcacgcattgactggcatgggcgatgcctcgctg
gtgtatgcgttaggtcgctggctattgtgtcagcatcgagaggggatcaaaagttgcggg
aaatgccattcttgccagttgatgagtgctggtacacatcctgattggcatgtgctccgt
cctgaaaaaggaaagcagagtctgggtgtcgatgcagtacgtgacgtgctggagacaata
tatcagcatgcccgtcaggggggggtgaaactgatttggttaccgctggcagagtcatta
accgaagctgcggccaatgctttgctgaaaacgcttgaagagccaccgatggaaacctat
ttcttactgggatgcagagagccttctcgcttgttggccacctttcgcagccgttgttta
taccactatcttgatgtgccggatgaaacgtatagcgtgcaatggctgagtagtcactat
ccgatggacagtcaggcgacactgacggcgctgagattatatgccggtgcaccgctggct
gccgccaagctgttgcagcctgaacattggaaaccacggcaaacactgtgcctgacgttg
tctgattgtctgatacagcggaactttttgccattagttactccgttgaatcacgaagat
gttgatgatcgaattcactggttgtctgcattgttacttgatgccataaagtgtcagcat
ggggcagaggagtatctggttaatcaggatcagcttcatctggtgcaacaattggcgaac
acgctggacagtgatcgactacaccatgaactgcgtcaatggttacaatgccgtcatcag
ttgcgcgtcataaccggtgtgaaccgcgagttattgttaacagaacggctgctgaactgg
gaacaaaatctgtcggtaacaacgcttttgccatcccatccattttctgtctga
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