Prodigiosinella confusarubida ATCC 39006: CWC46_13925
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Entry
CWC46_13925 CDS
T05968
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq01501
beta-Lactam resistance
serq02010
ABC transporters
serq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CWC46_13925 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWC46_13925 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWC46_13925 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serq02000
]
CWC46_13925 (oppD)
Transporters [BR:
serq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CWC46_13925 (oppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
ATP-synt_ab
AAA_29
DUF7305
DUF87
Motif
Other DBs
NCBI-ProteinID:
AUH00810
UniProt:
A0A2I5TKN7
LinkDB
All DBs
Position
complement(3093275..3094270)
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AA seq
331 aa
AA seq
DB search
MTMMNTSEPQDVLLDVKDLRVTFDTPDGDVTAVNDLNFTLNSGETLGIVGESGSGKSQTA
FALMGLLATNGHITGSARFNGREILNLPERELNRLRAEEIAMIFQDPMTSLNPYMRVGEQ
LMEVLMLHKKLSKSEAFEESIQMLDAVKMPEARKRMRMYPHEFSGGMRQRVMVAMALLCR
PKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGR
TMEYGTAREVFYNPTHPYSIGLLNAVPRLDAENEVLATIPGNPPNLLRLPKGCPFQPRCP
YAQERCNQPPALTPFGEGRLRACFRRVEELL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgatgaatacgtcagagccccaggacgtgttgttggacgtaaaagatttgcgc
gtaacttttgatacgccggatggtgatgtgaccgccgtgaatgatcttaattttacgctg
aattcaggtgaaacattggggattgttggcgagtctggttcgggtaaatcccagaccgcg
tttgctctgatgggattgctggccaccaatggacatattactggttcggcgcgtttcaat
ggacgggaaattctgaatctgcctgagcgtgagttgaaccggctacgtgctgaagaaatc
gccatgatttttcaggatccgatgacgtcgcttaacccttatatgagagtaggggagcag
ttgatggaagtgctgatgctgcacaagaagctcagcaagagtgaagcgtttgaagaatca
atccagatgttggatgcggtgaaaatgccagaagccagaaaacgtatgcgtatgtatcca
catgaattttctggtgggatgcgccaacgggtgatggttgccatggcgttgttatgtcgc
ccaaaactactgatcgctgacgaacccaccacggcgttggatgtgacggtgcaggcgcag
atcatgacgttgcttaatgagctcaagcgtgaatttaatacagctatcattatgattact
cacgacctgggcgtagtcgccggtatctgtgacaaggtattggtgatgtacgcgggacgt
actatggaatacggtacagcgcgcgaggtgttctataatccgactcatccttactccatc
ggtttacttaatgcggttcctcgtctggatgctgaaaatgaagtgttggccactattcca
ggtaatcctcctaatctgctgcgtttaccgaaagggtgtcctttccaaccacgttgccct
tatgcgcaggaacgttgcaatcagccacctgcattgacaccatttggagaaggtagactg
cgcgcttgttttagacgcgtggaggagttgctatga
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