Prodigiosinella confusarubida ATCC 39006: CWC46_13955
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Entry
CWC46_13955 CDS
T05968
Name
(GenBank) DNA-binding transcriptional regulator H-NS
KO
K03746
DNA-binding protein H-NS
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
serq03036
]
CWC46_13955
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_13955
Chromosome and associated proteins [BR:
serq03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CWC46_13955
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CWC46_13955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF6626
DUF3037
DUF4164
PaaX_C
SpoIIIAH
GrpE
Motif
Other DBs
NCBI-ProteinID:
AUH00816
UniProt:
A0A2I5TKQ3
LinkDB
All DBs
Position
3104429..3104836
Genome browser
AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECSLETLEEMLEKLEVVVNERRDEDNQAQAEIEERTRKLQQ
YRDMLIADGIDPNELLQSLGSAKVAGKSKRAARPAKYQYTDENGELKTWTGQGRTPAVIK
KAIEELGKSLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaagattctaaacaacatccgtactctgcgtgcccaggcaagggaa
tgtagtctggagactttggaagaaatgctggagaaactggaagtcgtagttaatgaacgc
cgcgatgaagataaccaggctcaggcagaaattgaagaacgtacacgcaaattacagcaa
tatcgagatatgttgattgctgatggtattgacccgaacgaattgctacagtcactgggg
tctgccaaagttgcaggtaaaagcaaacgtgctgcacgtccagccaaatatcaatatacg
gatgaaaatggcgaactaaaaacttggaccggtcagggtcgtacacctgcagttatcaag
aaagccattgaagaactgggcaaatctctggatgatttcctactctaa
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