Prodigiosinella confusarubida ATCC 39006: CWC46_14460
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Entry
CWC46_14460 CDS
T05968
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serq03016
]
CWC46_14460
Enzymes [BR:
serq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CWC46_14460
Transfer RNA biogenesis [BR:
serq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CWC46_14460
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUH00905
UniProt:
A0A2I5TKY9
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All DBs
Position
complement(3185509..3186630)
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AA seq
373 aa
AA seq
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MNYQLITTDAGLQQVCMQARRVTHVALDTEFVRTRTYYPQLGLIQLYDGDALSLIDPLAI
SDWTPFKALLQDVQVVKFLHAGSEDLEVFLNAFGMTPTPFIDTQILAAFLGRPLSCGFAT
LVEEYMQVTVDKSESRTDWIARPLSEKQCDYAAADVFYLLPMALRLVEEAKVAGWLEAAL
DECKLLCQRRQEVVDPALAYRDINNAWQLRGCHLACLQRLADWRLRKARERDSAVNFIVR
EEHLWQVARFLPNSLGEMDSLGLSGPEIRYHGKTLLMLVEESRNLAEADYPPPVINLIEY
PGYKKVFKEIKSLIQSCSEHSGLSAELLASRRQINRLLNWHWKLAHQESKPELLAGWRNE
LLGDALREILANY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttaatcactaccgatgccgggttacagcaggtttgtatgcaggcgcgc
cgtgtcactcatgtggcgctggacaccgaatttgtccgcacccgcacttattatccgcaa
ttgggattgattcaattgtatgacggtgatgcgctttcgcttattgatccgttggctatc
agcgattggacgccgtttaaggcgttgttacaggatgtgcaggtagtgaaattcctgcat
gcaggcagtgaagatcttgaagtgtttctcaatgcgttcggtatgactcctacacctttt
attgatacccagatcctggcggctttccttggccgtccgctttcttgtggttttgcaacg
ctggtagaggagtatatgcaggttacagtggataaaagcgagtcacgcacggattggatc
gctcgtccactaagtgagaaacagtgtgactatgccgccgccgatgtgttttatctgtta
ccgatggccttgaggctggtggaggaagctaaagtagcgggctggttagaggcggcactg
gatgaatgcaagctgctttgtcagcgtcgtcaagaggttgtcgatccagcgctggcgtat
cgagatatcaataatgcctggcagttgcgggggtgccatctggcttgtttgcagcgattg
gccgattggcggttacgtaaagcccgagagcgtgatagtgcggttaattttattgtcagg
gaagaacatctctggcaggttgctcgtttcctgccaaattcattgggtgagatggattct
ttgggattaagcggtccggaaatccgctatcatggtaaaaccttgttaatgctggtggag
gagagccgtaatttggccgaggcggattatccaccaccagtaatcaatctgatcgaatat
cctggttataaaaaagtctttaaagagatcaagtcgctaattcaaagctgtagtgagcat
agtggtttatctgctgaattgctggcctcccgccgccaaattaatcgtctgttgaattgg
cactggaaattagcacatcaggaaagcaaacccgagctgcttgctggttggcgtaatgaa
ttattgggtgacgcattgcgagaaattttggcgaactattaa
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