Prodigiosinella confusarubida ATCC 39006: CWC46_14585
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Entry
CWC46_14585 CDS
T05968
Name
(GenBank) pectate lyase
KO
K01731
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00040
Pentose and glucuronate interconversions
serq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CWC46_14585
Enzymes [BR:
serq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
CWC46_14585
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GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
AUH00928
UniProt:
A0A2I5T8M3
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All DBs
Position
3210859..3212490
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AA seq
543 aa
AA seq
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MSIFSHLDTSKEIQLDLWLAALNSHIEKIQQYGHSHSNPTPLLADGFDVQTRTPVVWKFP
DGHDAPISNFASQQNWLRLLDSMSIVTEIEKYQKTAISQCEFFFSHFVDENSGLFYWGGH
RFINLDSLKSEGPESKSLVHELKHHLPYYPFLHRINAEKTLHFLQSFWNAHVEDWNSLDL
GRHGDYAKPRDPHVFMHTHHDVVDPAKWPELPLTKGLTFVNAGTDLIYAAFAYAQFSGDK
QAALWGKHLYRQYVLARNPETGMPVYQFSSPLQRQPIPDDDNQTQSWFGDRAQRQFGPEF
GAIAREANVLFRDMRPLLIDSPLAMLDILHQHPDSDMLEWVISGLKNYYQYAYDADSNTL
RPMWNDGQDMTGYRFKRDGYYGKAGTELKPFPLEGDYLLPLVRAYRLSGDVELYTLITTM
LERLGKDGLSTVATPFLLLAMIELAEHQQSKKWADHAWALAEILFDRHFHHGLLTRSEKH
RYVRLDDPFPLILLALVAACKNKLNKCPPILTQGGYVHGDFRINGENRVIYDIEFIYPEL
LTH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttttagtcacttagacaccagcaaagaaatacagctcgatttatggctcgcc
gcgctgaacagccatattgaaaaaatacagcaatatggacacagccacagtaatccgaca
ccgttattggctgatggcttcgatgtacaaacgagaacgccagttgtctggaaatttcct
gatgggcacgatgctcccatttctaattttgccagccagcaaaattggcttcgtttgtta
gattccatgagtatcgtcacagaaatagagaaatatcagaaaacggctatttcccaatgt
gaatttttcttttctcactttgttgacgaaaatagtggtcttttctattggggtggacat
cgctttattaatctggactcgttgaaaagcgaaggaccagagtcaaaatctctggtgcat
gaattaaaacaccatttaccctattacccgttcttgcaccgtattaatgccgaaaaaaca
cttcattttctacagagcttctggaacgcacacgtcgaggattggaactcactggattta
ggtcgtcatggtgattatgccaaaccacgcgatccacacgtttttatgcacacgcaccac
gatgtggtagaccctgcaaaatggcctgaattaccgctgacgaaagggcttacttttgtc
aatgccggtaccgacctgatttatgccgcctttgcctatgcacaatttagcggggataaa
caagcggccttatggggaaaacatctctatcgtcaatatgtattggcgcgcaatccggaa
accggaatgccggtgtaccaattcagctcgcccttgcaacgccagccgattccggacgac
gataatcagacacagtcctggttcggcgatcgcgcccaacgccagtttggcccggagttc
ggcgccattgcccgtgaagcgaatgtgttattccgggatatgcgtccattgttgatcgac
agcccactggcgatgctggatatcctgcatcagcaccctgacagtgacatgctggaatgg
gtgatttccgggctgaaaaactattaccaatatgcttacgacgctgacagtaatacgttg
cgccccatgtggaatgacggtcaggacatgaccggttatcgtttcaaacgtgatggttac
tacggaaaagcagggacagagcttaagccctttccactagaaggtgattatttattgcca
ctggtgcgtgcttaccgactgagtggtgatgtggaattgtacacactgatcactaccatg
ctggagcgtctgggaaaagacggattaagtacggttgcgaccccatttctactgcttgcc
atgatagaactggctgaacatcagcaatcaaaaaaatgggctgatcatgcctgggcactg
gcagaaatattatttgatcgtcattttcatcatggtctgttaacccgttcagaaaagcat
cgttatgttcgtctggatgaccccttccctttaattttgctggcgctggttgccgcctgc
aaaaacaaactgaacaaatgcccgcccatactgacacagggggggtatgtacacggagac
tttcgcattaatggggaaaatagggtcatctatgacatagagtttatttatcctgaatta
ttaacacattaa
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