Prodigiosinella confusarubida ATCC 39006: CWC46_15240
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Entry
CWC46_15240 CDS
T05968
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CWC46_15240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_15240
Enzymes [BR:
serq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWC46_15240
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CWC46_15240
RecFOR pathway proteins
CWC46_15240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
AAA_16
Mg_chelatase
TIP49
AAA_14
nSTAND3
Rad17
AAA_18
AAA_2
NTPase_1
AAA_17
RNA_helicase
AAA_24
Bac_DnaA
AAA_28
NB-ARC
ABC_tran
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AUH01049
UniProt:
A0A2I5T901
LinkDB
All DBs
Position
complement(3338302..3339306)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIAPIVVEEEEIFDRAIRPKLLSEYVGQPKVREQMDIFIQAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVSRSALCLGLEMTEDGALELARRSRGTPRIANRLLRRVRDFSEVKSDG
TITLDVAVQAMDMLAVDIEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRIATQHAYRHFGLTREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgatcgtttgattgcgccgattgttgttgaagaggaagagatcttcgac
cgggctatccggcctaaactgttgtcggagtacgtcggacagccgaaagtccgtgagcag
atggatatatttattcaggcggcgcgcaagcgtggtgacgcgttggatcatctgctgatt
ttcggcccgccggggctgggtaaaaccacactggccaatattgtcgcgaacgaaatgggg
gtcaatttgcgtaccacatccggcccggtgctggagaaagcgggtgacctggcggcgtta
ctgaccaatcttgaaccccacgacgtgctgtttattgatgaaattcaccgtctatcgcca
gtagtagaagaagtgctttatccggctatggaagattatcagttggatatcatgattggt
gaagggccggcggcgcgctccattaaactggatttacccccgtttacgctgattggcgcg
accacccgtgccgggtcgctgacctctccgctgcgtgaccgtttcgggatcgtgcagcgt
ctggagttttatcaggtcgcggacttgcagcatattgtcagccgtagcgcactgtgtctg
gggctggagatgacggaagatggcgcactggaattggctcgtcgttcccgcggtacgcca
cgtattgccaaccggctgttgcgccgggtacgtgacttttctgaagtgaaatcggatggc
acgattacgctggacgtggccgttcaggcgatggatatgctggcggtagatattgaagga
tttgattttatggaccgcaaactgctgttggctgtgatcgataaatttatgggtgggccg
gtagggttggataacctggcagcggccatcggtgaagagcgtgaaaccattgaagatgtg
ctggagccttatctgattcagcaaggctttttgcaacggacaccgcgtgggcgtatcgcc
actcagcacgcttaccgtcattttggcctgactcgcgaggagtaa
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