Prodigiosinella confusarubida ATCC 39006: CWC46_19155
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Entry
CWC46_19155 CDS
T05968
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_19155
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CWC46_19155
Archaeal homologous recombinant proteins
CWC46_19155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
ABC_tran
cobW
AAA_21
TsaE
NTPase_1
nSTAND3
GTP_EFTU
AAA_22
AAA_25
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AUH01734
UniProt:
A0A2I5TND9
LinkDB
All DBs
Position
4212256..4215939
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKVDFTREPFVSNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVTPTQNELMTRHTAESLAEVEFEVKGIAYRAFWSQRRARNSPEGNLQPPKVELARCAD
GKILTEKINDKLAMIADITGLDFDRFTKSMLLSQGQFAAFLNADANERAELLEELTGTEI
YGLISERVFEQHKEAQVQLDTFRARASSIELLSDEQRAELEHQLSARQQREQSLSLQRDE
ILAHQRWYETLAQCQQALTATQQQRSQVEQMQQQARPQLERLATSAPAEKLRPLYDTQER
CQREKTLLAQHITDLTDQLINQQSVVALLKSQAEKAIVAQQEHADYRQQQETLINEQVLP
LDLHIATQQEQRNRYQHALEQQRNQQKAAIGKLEQLRQQYRQTQERLRQIDIYRQQNLMY
QHWGSHIPLWQAQFPQQRKLLQELLILQDRLAQQQEQSEHLQRQQVKLIEKRDAQQAATG
RAQQLLGQHQQHHQQQEQQLPVTTLQQQLVQLTTQRPQRQQLSTSTTVLHRLSNQYQLLD
AQQQDSQHRIEQLEALQLRQRQEYQRQAQHLIDLDKRYELEQRIASLENERSQLQPGKEC
PLCGSTHHPAVERYQTLRVSETQNRLHALRQEVETLKAAVIQTETQLQLLQQQRQQQQTA
LLNVSQEHEALQQECQTLSEHLLVNFNPQQPETLITWLEQCDEQERSLQSQITEREQNQH
QIQKSKDLLTAANQLLQQTEQQMALNIQQQRMLETTHIELQQTREKVEQEQNRLHQSITQ
SLTRFGLPIPDADEQESWLGQRQMEWLRWQENEHEQHQQTPLLSSLNTEIEGDERRLREI
DEVIKTQQQQLTETEQSLEQAQQTRWQLFGNKQVNDVLGQLRQLSQKHEQYRQKSQAQWQ
QGQSAFSRLTGEKGSLEQQYQRTQAAYQQAVQHFDTALQQSQFENQDAFKRALLDEAERN
QLMALKEKISQRQQQVEALHQQAELALAQHLAGKPDSLSEDINPSDINQTLAGLSNELKT
EVQRQGELRQQLASDQQHRLKQQVLLDDITKSQQGCDDWGYLNHLIGSQKGDKFRRFAQG
LTLDHLVYLANRQLSRLHGRYLLQRKASDTLELQVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSNKTRIDSLFLDEGFGTLDGETLDSALDVLDNLNASGKTIGVISHVEAMK
ERIQVQIRVKKRNGLGISQLDSEYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactcagcctgcgtttaaaaaacctcaactcgctacaaggcgagtggaaagtt
gatttcacccgcgaacctttcgtcagtaatagcctgtttgccatcaccgggccgaccggt
gctggtaaaaccacactgctcgacgccatctgtctggcgttatatcaccagacaccgcgg
ctgaaagtgacacccactcagaatgaactgatgacgcgacataccgctgagtcgctggcc
gaagttgaatttgaagtcaagggtattgcctatcgagccttctggagtcaacgtcgggcc
cgtaattcaccggaagggaatctacaaccaccgaaagtcgagctagcccggtgtgccgac
ggtaaaattctgacagaaaagatcaatgacaagctggcaatgattgccgatatcaccggc
cttgatttcgaccggttcaccaaatccatgctgttatcccaggggcaattcgccgctttc
ctcaacgctgacgccaacgaacgggcagaattactggaagagctgacaggtacggagatt
tacggcctcatttccgaacgggtatttgaacagcataaagaagcacaggttcaattggat
acattccgcgcacgcgccagcagcatcgaactgctaagtgatgaacagcgtgcggaactg
gaacatcagttgtcagcacgacaacaacgagagcagtcactgagtctacaacgtgatgaa
atcctcgcacatcagcgctggtatgaaacactggcgcaatgtcagcaggcgctcactgcc
acgcaacagcagcgcagtcaggtagagcagatgcaacaacaggctcgaccacaactggaa
cgattggcgacaagtgcgccagcggaaaaattacgccctctttatgatacgcaagaacga
tgtcaacgtgaaaaaacgttactggcccagcacattactgacttgactgaccagttgatc
aaccagcaatccgtcgtggctttactgaaatcacaagccgaaaaagcgatagtggcgcaa
caggaacatgccgattaccgtcagcaacaggaaaccctgatcaacgaacaagtcctaccg
ctggacctccatatcgccacgcaacaggagcaacgcaaccggtatcagcacgcgctagag
caacagcgtaaccaacagaaagccgctatcggcaagctagagcaattacgtcagcagtat
cgccaaacccaggaacggttaaggcaaattgacatttaccgacagcaaaacctgatgtat
caacactggggaagccatattccgctttggcaggcccagttcccacagcaacggaaacta
ttacaggaactgctgatactacaggacagacttgcacaacagcaggagcagtcagaacat
ctgcaacgtcagcaggtaaagctaatcgaaaaacgtgatgcacagcaggccgccaccgga
cgagcgcagcagttactcggacaacatcagcaacaccaccagcaacaagaacaacagctg
ccagtaacgacgcttcagcagcagcttgtccaactcaccactcagcggccgcaacggcaa
caactctcgaccagcaccacagtcctgcaccgattgtccaaccagtatcaattgttggat
gcacagcaacaggactctcaacaccgcatcgagcagttggaagcattacagttacgacaa
cgtcaggagtatcaacgacaggcccaacacctgatcgatttagataaacgctatgaactg
gaacagcggattgccagtcttgaaaacgaacgaagtcaattgcagccgggtaaagagtgt
ccattgtgtggttctacacatcatccggcagttgaacgctaccagacactgcgcgtttca
gaaacccagaatcgactgcatgccctacgtcaggaagtggaaacactgaaggcggcagtg
atacaaacagaaacgcagctacagttattgcagcaacagcgtcaacaacaacaaactgca
ctgttaaatgtttctcaggaacatgaggcactacaacaggaatgccaaacgctaagtgaa
cacttacttgtaaacttcaacccacagcagccagaaacacttatcacctggctggaacag
tgtgatgagcaggaacggtcactccagtcccagattacagaacgagagcaaaatcagcac
cagatacagaaaagtaaggatttactgaccgcagccaatcagctattgcaacaaacggaa
cagcagatggcgttgaatatccagcagcaacgcatgctggaaaccacgcatatcgaattg
caacaaactcgggaaaaggtcgagcaggaacaaaatcgactgcaccaatccatcacgcaa
tcacttacgcgtttcggtctgccaattcccgatgctgacgagcaagaatcatggcttggt
caacgtcagatggagtggctgcgatggcaggagaacgagcacgaacaacatcagcaaacc
cctctgttatcgtcactgaataccgaaattgaaggtgatgaacggcgtttgcgtgaaata
gacgaagtcatcaaaacacaacaacagcaattgacggaaacggagcagtcgctggaacag
gctcaacagacccgctggcagttattcggcaataaacaggtcaatgacgttcttgggcaa
ttgcgtcagctcagtcagaagcatgaacaataccgtcagaagtctcaggcacaatggcag
caaggacagtctgcgttcagccgtcttaccggtgaaaaaggcagtctggaacagcaatat
caacgaacacaagcagcttatcagcaggcagtacagcattttgatactgcgctgcaacag
agccagtttgagaatcaagacgcattcaaacgcgcgctgttggacgaagccgagcgtaac
cagcttatggcgttgaaagaaaaaatcagtcagcggcagcagcaggttgaggcattgcat
cagcaggcggaactggcgctggcacagcacctggccggaaaacctgattcattgtcagaa
gacattaacccgtcagatatcaatcaaacgctcgctggattgagcaatgagcttaaaacc
gaagttcaacgacagggagagttgcgtcaacaactggccagtgaccagcaacaccgactc
aaacaacaggtattgctggatgatattaccaaaagccagcaaggatgcgacgactggggt
tatcttaaccacctgattggctcgcaaaaaggcgacaaattccgccgttttgcccaggga
ttaacactggaccatctggtctatttggccaaccgccaactttcacgcctgcatggccgt
tatctgctgcaacgtaaagcctctgacacgctggagttacaggtagtagatacctggcag
gcggacgccgttcgggatacgcgaaccttgtccggcggggaaagttttctggtcagtctg
gcgctggcgctggcgctctccgatttggtcagtaacaaaacacgcattgactcgctattt
ctggatgagggcttcggtacgttggatggtgaaacgctggattccgcgctggatgtactg
gataacctgaatgcctctggcaaaacgattggcgtaatcagccatgttgaggcgatgaaa
gagcgaattcaggtacaaattcgggtaaaaaaacgcaacggtctgggcatcagccaactg
gacagtgagtatgcagtgaaataa
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integrated database retrieval system
