Prodigiosinella confusarubida ATCC 39006: CWC46_21685
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Entry
CWC46_21685 CDS
T05968
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00521
Streptomycin biosynthesis
serq00523
Polyketide sugar unit biosynthesis
serq00525
Acarbose and validamycin biosynthesis
serq00541
Biosynthesis of various nucleotide sugars
serq01100
Metabolic pathways
serq01110
Biosynthesis of secondary metabolites
serq01250
Biosynthesis of nucleotide sugars
Module
serq_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
serq_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CWC46_21685 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CWC46_21685 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CWC46_21685 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CWC46_21685 (rfbB)
00525 Acarbose and validamycin biosynthesis
CWC46_21685 (rfbB)
Enzymes [BR:
serq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CWC46_21685 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Gp_dh_N
NmrA
Motif
Other DBs
NCBI-ProteinID:
AUH02172
UniProt:
A0A2I5TCA7
LinkDB
All DBs
Position
complement(4753814..4754881)
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AA seq
355 aa
AA seq
DB search
MKILVTGGAGFIGSSVVRHIIKNTANAVVNVDKLTYAGNLESLTDIENHERYTFEQVDIC
DRPRMDHVFQVHQPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLESARTYWNTLGT
EKKSGFRFHHISTDEVYGDLDSADGLFTESTSYSPSSPYSASKASSDHLVRAWYRTYGLP
TIITNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGDGMQIRDWLFVEDHARALYKVVS
EGKVGETYNIGGHNEKTNIGVVKTICSLLEELVPNKPQGVKAYQDLIIYVKDRPGHDVRY
AIDAGKIARDLGWVPEETFESGIRKTVEWYLNNQSWWSRVLDGSYSRERLGAGDK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggttacaggcggggccggttttattggttcctcggtagttcgtcatatc
attaaaaatacggcgaatgctgttgttaacgttgataagcttacctatgcgggaaatctg
gagtctctgaccgatatcgaaaaccatgaacggtatacgttcgagcaggtcgatatttgc
gatcggcccagaatggatcacgttttccaggtacaccagccagacgttgtcatgcatctg
gctgcagaatcgcatgttgatcgctcaattgatggcccggctgcctttattgaaacgaat
atcgtgggaacttataccctgctggagtctgctcgtacttactggaatacattaggtacg
gagaaaaaatccggatttcgtttccatcatatctctaccgatgaagtctatggtgacctg
gacagtgctgacgggcttttcactgagtcgacatcttattctccaagcagcccttattct
gcttccaaggcgtcaagtgatcacctggttcgggcatggtatcggacttatggtttgccg
accattatcaccaactgctcgaataactatggcccctaccattttccggaaaagctcata
ccactaatgattcttaatgcgcttgaagggaaaccgttacctgtctatggcgatggaatg
cagattcgtgactggctatttgttgaggatcatgccagagccctttataaggtcgtttcc
gaagggaaagtcggggagacgtacaatattggcggtcataacgaaaaaaccaatattggt
gtggtgaaaacaatatgttcactattggaagagttggttcccaataagccccagggcgtg
aaggcgtatcaggatctgattatctatgttaaagatcggcccggtcacgatgttcgttat
gctattgatgccggaaaaattgcacgggatcttggctgggtaccggaagaaacctttgag
tccgggattcgcaaaacagtagagtggtatttgaataatcagagctggtggagccgtgtc
cttgatggttcttatagccgtgaacggttaggcgcgggggataaataa
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