Prodigiosinella confusarubida ATCC 39006: CWC46_21725
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Entry
CWC46_21725 CDS
T05968
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
serq03036
]
CWC46_21725 (xerD)
Chromosome and associated proteins [BR:
serq03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CWC46_21725 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AUH02179
UniProt:
A0A2I5TPM1
LinkDB
All DBs
Position
complement(4762799..4763698)
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AA seq
299 aa
AA seq
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MHEQDQALIEQFLDALWLERNLAENTLASYRLDLQSLAEWLAHHDNHLLQVQSLDLQAFL
AERIEGGYKATSSARLLSAMRRLFQYLYREKQRLDDPSAVLSSPKLPQRLPKDLSEAQVD
SLLKAPSVEQPLELRDKAMLEVLYATGLRVSELVGLTISDVSLRQGVVRIVGKGNKERLV
PLGEEAVYWLEQYLEYSRPWLLNGRTLDIMFPSNRSQKMTRQTFWHRIKHYAILASIDSA
KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHKQHHPRA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaacaggatcaggcattgattgagcagtttctcgatgccttatggctggagcgg
aatctggcggagaatacgctggcgtcttatcggctggatttgcagtcgctggccgagtgg
ctggcgcatcacgacaatcatctattgcaggttcaatcactggatttacaagcatttttg
gcggaacggatcgagggtggctataaagcgaccagttcggctcgtctgttgagtgccatg
cggcgcctgtttcaatatctttatcgggaaaaacagcggctggacgatcctagtgcggtg
ctctcttctcccaagttaccccagcgtttaccaaaagacttgtcggaggcgcaagtcgac
tctctattgaaggcacccagcgtcgagcaaccgcttgaactgcgggataaagccatgctg
gaagtgttgtacgccactgggttgcgtgtctctgaactggtgggactgaccatcagtgat
gtcagcctgcgtcagggggtggtgcgcatagtcggaaaaggtaacaaggaacggctggta
ccgctgggggaagaagcggtttactggctggagcagtacctggaatacagccgtccctgg
ttactgaatggtcggacactggatatcatgtttcccagtaaccggagtcagaaaatgaca
cgccagactttctggcatcgtatcaagcactatgcgattctcgcctctattgatagtgcg
aaactctctccgcatgttttgcgtcatgcctttgcgacccacttattgaaccacggcgcc
gatttgcgggttgtacagatgctattgggtcatagtgacctttccaccacgcaaatttat
acacatgtcgcgacagagcgccttaaacaactgcataaacagcatcatcctcgggcatga
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