Prodigiosinella confusarubida ATCC 39006: CWC46_21945
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Entry
CWC46_21945 CDS
T05968
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq02010
ABC transporters
serq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CWC46_21945
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWC46_21945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serq02000
]
CWC46_21945
Transporters [BR:
serq02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
CWC46_21945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
MukB
RsgA_GTPase
AAA_23
AAA_30
AAA_27
TniB
Motif
Other DBs
NCBI-ProteinID:
AUH02217
UniProt:
A0A2I5TPP7
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All DBs
Position
4808878..4810443
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AA seq
521 aa
AA seq
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MPYTVSPSPPLLQARGISKQFSGVVVLKSIDFTLRSGQVHALLGGNGAGKSTLMKIIAGV
LPPDSGIIEINGQPCSDLTPAKAHQLGIYLVPQEPMLFANLSVQENILFRLPKHQADKKK
MAQLLESLGCRLDLSASAGSLNVADQQLVEIMRGLMRDSRILILDEPTASLTPAEANRLF
SQIKILLQQGVGVVFISHKLPEIRQLADWVSVMRDGGIALSGATADFSTETIIQAITPQS
KNGALSDTQKLWLELPGNRRTQSRAQSDQPVMQVIDLSGEGFMHISFEIRAGEILGLAGV
VGAGRTELAETLYGLRPASSGRITLEDVDITTMKTVDRLTTGLVYLPEDRQASGLYLDAP
LSWNVCSLTYDRQGVWTHPAQEAATLERYRRALNIKFNHLEQPVRTLSGGNQQKLLIAKC
LEANPLLLIIDEPTRGVDVSARSDIYQLIRSIAAQHVAIIFISSDLEEVVQMADRVLVMH
QGEISGALSGDEMTVDTIMHIAFGEQHIDTHQPTENEGVAC
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccatacaccgtctccccttcaccaccgctgctccaggctcgaggtatcagcaagcag
ttttctggcgtagtggtattgaaaagtatcgatttcactttacggtctggtcaggtccat
gcactgctcggggggaatggtgcgggtaaatccacactgatgaaaatcattgccggagtc
ttaccaccggatagtggcatcatcgagattaatggacagccatgctccgacctcacgccg
gcgaaagcgcatcagttgggtatttatctggttccgcaagaaccgatgttgtttgccaat
ctttcggtgcaggaaaatatcctgttccgtttgccaaaacatcaagctgataaaaagaaa
atggcccagttgctggaaagcctgggttgccgcctggatctgtctgccagcgccggttcg
ctcaatgttgccgatcaacagttagtggaaattatgcgcggcctgatgcgcgactcgcgt
attttaatccttgatgaaccaaccgcctcattaacgcccgccgaagccaatcgtttattc
agccagatcaaaatattgctgcaacagggcgtcggtgtcgtctttatctctcataaattg
cctgaaatccgccaactggctgactgggtcagtgtcatgcgtgatggtggcattgcgttg
agcggcgccaccgcggatttttctaccgaaaccattattcaggccattacgccacagagt
aaaaatggagcgttaagtgatacacaaaaattatggctggagctgccgggtaaccgccgc
acccaatcacgcgctcaatccgatcaacccgtaatgcaagtgatagacctgagcggtgaa
ggattcatgcatatctcctttgaaatccgggccggtgaaattctcggattagcgggcgtc
gttggcgcaggcagaacggagctggccgagacattgtatggcttacgtcctgccagcagt
ggccgtattacactggaagacgttgatatcactacgatgaaaaccgtcgatcgcttaacg
accgggttggtttatctgcctgaagaccggcaggcttctggtctctaccttgatgccccg
ctgagctggaatgtgtgttcactgacatatgaccgtcagggagtgtggacccatccggca
caggaagccgcgacgctggagcgctaccgccgggcactcaacattaaatttaaccatctc
gaacaacctgttcgcaccttgtccggcggtaatcaacaaaaactgctgattgccaaatgc
ctggaggctaatcccctgctgctgatcatcgatgaacccacccgtggtgtggatgtatca
gcccgcagtgatatctatcaattgattcgcagtattgccgcacagcatgtggcgattatt
tttatctcttcggatttggaagaagtggtgcagatggctgaccgcgtgctggtcatgcat
cagggggaaatcagtggcgcactgagcggcgatgaaatgaccgtcgatacgattatgcat
atcgcctttggtgaacagcatatcgacacccatcaacctaccgaaaatgagggtgtagca
tgttga
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