Prodigiosinella confusarubida ATCC 39006: CWC46_22035
Help
Entry
CWC46_22035 CDS
T05968
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serq03016
]
CWC46_22035
Enzymes [BR:
serq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CWC46_22035
Transfer RNA biogenesis [BR:
serq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CWC46_22035
Prokaryotic type
CWC46_22035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AUH02233
UniProt:
A0A2I5TCG0
LinkDB
All DBs
Position
complement(4827505..4828455)
Genome browser
AA seq
316 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPQNISSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERPVTFTGDELAHALDGFRGTIQ
QIPSMYSALKYQGRPLYEYARQGLVVPREAREITVYELLFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVANYPIERMITLEQLNGLLDQVDASSLMSALDAQLL
PMDSPVQAFPEVNLSLVMAGYLKLGQAVRTAGAPLSGMVRITEGEEHKFIGMGEMDVEGR
VAPRRLVVEHAEPAIQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcctcgtcgtcgcggccgagatataaacggtgtgttattgctagataagcca
cagaatatatcgtctaacgatgtactacaaaaagtaaagcgtatcttcaatgccaacaga
gcaggccatacgggggcgttggatccgctggcaacaggaatgctgccgatttgtctggga
gaagcgaccaagttttcccagtatctgttggattcagataaacgttatcgtgttattgcc
cggttggggcagcgcactgatacttctgatgctgacggtaatgtgatcgaagaacgcccg
gttacgttcactggtgatgagctggcacatgcgctagatggatttcgcggcactatccag
cagattccatccatgtattccgcactcaagtatcagggtcgaccgttatatgagtatgcc
cgtcaagggctggtggttccgcgtgaagcacgggaaatcactgtctatgagttgttgttt
atccgctgggaaggggatgagctggagctggaaattcattgctccaaaggcacttatatt
cgtaccattattgacgatttaggtgaaaagcttggttgtggtgcacatgtcatttacctg
cgtcgtttacaggtagcaaattaccctatcgagcgaatgataacgctggagcagcttaac
ggattgctggatcaggtggatgcatcttcactaatgtcggcactggatgcacagttactg
cctatggatagtccggtacaagcgtttcctgaagtgaatctttctctagtgatggcagga
tatttgaagctgggccaggctgttagaactgccggggcgccactgtcgggtatggtgcgc
attactgaaggtgaagagcataaatttatcggtatgggtgagatggacgttgaaggccgt
gtggcaccacggcgtttggtggtcgaacacgcagagccggctatccagtga
DBGET
integrated database retrieval system
