Prodigiosinella confusarubida ATCC 39006: CWC46_22050
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Entry
CWC46_22050 CDS
T05968
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serq03021
]
CWC46_22050 (nusA)
03009 Ribosome biogenesis [BR:
serq03009
]
CWC46_22050 (nusA)
Transcription machinery [BR:
serq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CWC46_22050 (nusA)
Ribosome biogenesis [BR:
serq03009
]
Prokaryotic type
rRNA transcription factors
CWC46_22050 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
DUF4332
IMS_HHH_1
HHH_2
CM_2
KH_2
LRR_EndoS
Glyoxalase_4
MRP-S35
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AUH02236
UniProt:
A0A2I5TPR9
LinkDB
All DBs
Position
complement(4831656..4833146)
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AA seq
496 aa
AA seq
DB search
MNKEILAVVEAVSNEKAVPREKIFEALETALATATKKKYEQEIEVRVCIDRKTGDFDTFR
RWLVVNEVTLPTREITLEAAQFDDPTVGLGGYIEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVEQFREQEGEIVTGVIKKVSRDNISLDLGNNAEAVIGREDMLPRENFRPGDRVR
GVLYSVRPEARGAQLFVSRSRPEMLIELFRIEVPEIGEELIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELGGERVDIVLWDDNPAQFVINAMAPADVASIVVDE
DNHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTIEDLQEKHQAEAHAAIDIFT
KYLDIDENFATLLVEEGFSSLEELAYVPIKELQEIDDLDEEIVESLRERAKAALTTLALA
REESRGDVQPADDLLSLPGLSREMAFKLAACGVCTLEDLAEQGVDDLADVEGLDEKRAGE
LIMAARNICWFGDDNE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctggctgttgttgaagcggtttcaaacgaaaaagccgttccgcgc
gagaaaatttttgaagcgctggaaacagcattagcaacagcaactaagaaaaagtatgaa
caggaaattgaagtccgtgtctgtattgaccgtaaaacaggggactttgatacatttcgt
cgctggctggtagtgaatgaagtcactttaccaacacgtgagatcaccctggaagcggca
cagtttgatgatcctaccgtcgggctgggtggttatattgaggaccagattgaatctgtc
accttcgatcggatcactactcaaacagccaagcaggttattgttcagaaggttcgtgag
gctgaacgggcgatggttgtcgaacagttccgtgaacaggaaggtgaaatcgtaaccggt
gtaatcaagaaagtgagtcgtgataatatttccctggatctggggaataacgccgaagcg
gttattggccgtgaagatatgcttccccgtgagaattttcgtccaggtgaccgtgtgcga
ggcgtgctttattccgttcgtccagaagcccgtggagcgcagttgtttgttagccgttct
cgcccggaaatgctgattgagcttttccgcattgaagtaccggaaattggtgaggaactc
attgaaatcaaagctgcggcacgtgatccaggatctcgtgcgaaaatcgcagttaaaacc
aatgataagcgtatcgatccggtaggcgcctgcgtaggtatgcgtggtgcgcgcgtacag
gcagtctctagtgaactgggtggtgagcgtgttgatattgtgctatgggatgataatccg
gcacagtttgttattaatgcaatggctccggcagatgtggcatctatcgtggtagatgaa
gacaaccataccatggatatcgctgttgaagctggcaacctggctcaggctatcggccgt
aacggacaaaacgtgcgtttggcttctcagctcagtggctgggaattgaacgtgatgacc
atagaagatcttcaggagaaacatcaggctgaagctcatgcagcaatcgatatcttcact
aaatatctggatattgatgaaaatttcgccacacttttagtggaagagggtttctcttcg
ctggaggagctggcttatgtaccgatcaaagagttgcaagaaattgacgatctggatgaa
gaaatcgttgaatctctgcgtgagcgtgcaaaagccgcattgaccacgttggcgctggcg
cgtgaagaaagccgtggtgatgttcagccggccgatgatttgctcagtttgcctggtttg
tcccgtgaaatggcattcaaactggctgcatgtggtgtatgtacgttggaagatcttgct
gagcagggcgtcgacgacctggcagatgttgaagggcttgatgaaaaaagagccggtgag
ctaattatggctgcacgtaatatctgttggtttggtgacgacaacgaataa
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