Prodigiosinella confusarubida ATCC 39006: CWC46_22375
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Entry
CWC46_22375 CDS
T05968
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWC46_22375 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serq03019
]
CWC46_22375 (groL)
03110 Chaperones and folding catalysts [BR:
serq03110
]
CWC46_22375 (groL)
03029 Mitochondrial biogenesis [BR:
serq03029
]
CWC46_22375 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
serq04147
]
CWC46_22375 (groL)
Enzymes [BR:
serq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CWC46_22375 (groL)
Messenger RNA biogenesis [BR:
serq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CWC46_22375 (groL)
Chaperones and folding catalysts [BR:
serq03110
]
Heat shock proteins
HSP60 / Chaperonin
CWC46_22375 (groL)
Mitochondrial biogenesis [BR:
serq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CWC46_22375 (groL)
Exosome [BR:
serq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CWC46_22375 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CWC46_22375 (groL)
Exosomal proteins of breast cancer cells
CWC46_22375 (groL)
Exosomal proteins of colorectal cancer cells
CWC46_22375 (groL)
Exosomal proteins of bladder cancer cells
CWC46_22375 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AUH02293
UniProt:
A0A2I5TPY5
LinkDB
All DBs
Position
complement(4892162..4893814)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVRVTLGPKGRNVVLDKSFGAPSITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAQAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKQETGSVELESPYILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAATV
ISEEIGLELEKATLEDLGQAKRVVINKDTTIIIDGVGDESTIQGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAASSVTASGLKGENEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANKVKAGEGSYGY
NAYTEAYGDMIEMGILDPTKVTRSALQYAASVAGLMITTECMVTELPKDDKADLGGAGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgcacgagtaaaaatgttacgcggcgtg
aatgtactggctgatgcagtgagagttactctgggtccgaaagggcgcaatgtcgttctg
gataaatccttcggcgcaccttctatcactaaagacggtgtatccgttgcgcgtgaaatc
gaactggaagacaagtttgagaacatgggcgcccagatggtgaaagaagtcgcttctaaa
gcgaatgacgcagcaggtgacggtaccacgactgctaccgttttggcccagtccatcgtt
aatgaaggtctgaaagccgttgctgcgggtatgaacccgatggatttgaaacgcggtata
gataaagcggttatcgctgcagttgaagaattgaaaaaactgtctgtgccttgctctgat
tccaaagctattgctcaggtaggtactatctccgctaactccgatgaaactgtgggcaag
ttgattgctcaagccatggagaaagtggggaaagaaggtgtcatcaccgttgaagaaggt
accggtctgcaagacgaactggatgtggttgaaggtatgcaatttgaccgcggttatctg
tctccttacttcatcaataagcaagaaaccggttctgttgaactggaaagcccatatatc
ctgttggctgacaagaaaatctccaatatccgtgaaatgctcccggtacttgaagctgtc
gcaaaagccggcaagccactgttgattatcgctgaagacgtagaaggcgaagcactggct
actctggtagtgaacaccatgcgtggtatcgtgaaagtggctgccgttaaggctccaggc
tttggcgatcgtcgtaaagccatgctacaggacatcgctactctgactgccgctactgta
atttctgaagagatcggtctggagttggaaaaagcaacactggaagatctgggtcaggct
aaacgtgtcgtgatcaacaaagataccactatcattattgatggcgtgggtgatgagtcg
actattcaaggtcgtgttacccagattcgtcagcagattgaagaagccacttctgattat
gaccgtgaaaaactacaggaacgtgtggccaaactggctggcggtgttgcagttatcaaa
gttggcgctgcgactgaagtcgaaatgaaagagaaaaaagcacgtgttgaagatgcgttg
catgctactcgtgcggcagttgaagaaggcgtagtcgctggcggtggtgtggcattgatt
cgtgcggcatcttctgtcacggcgtctggcctgaaaggtgaaaacgaagatcagaacgta
ggtatcaaagttgcactgcgtgcaatggaagcacctttgcgtcagatcgtgattaatgcg
ggtgaagaagcctccgttattgcgaacaaggtgaaagcgggtgaaggtagctatggctat
aacgcttacactgaagcgtatggcgatatgatcgaaatgggtatcctggatccgaccaag
gtaactcgttctgctctgcaatatgccgcatctgttgctggtctgatgattaccactgaa
tgtatggtgaccgagttgccaaaagacgacaaagctgacttaggcggagccggtggcatg
ggcggtatgggtggtatgggcggtatgatgtaa
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