KEGG   Serratia sp. SCBI: SERRSCBI_00805
Entry
SERRSCBI_00805    CDS       T03314                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sers  Serratia sp. SCBI
Pathway
sers00300  Lysine biosynthesis
sers00470  D-Amino acid metabolism
sers01100  Metabolic pathways
sers01110  Biosynthesis of secondary metabolites
sers01120  Microbial metabolism in diverse environments
sers01230  Biosynthesis of amino acids
Module
sers_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sers00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SERRSCBI_00805 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SERRSCBI_00805 (dapF)
Enzymes [BR:sers01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SERRSCBI_00805 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AIM19800
LinkDB
Position
188214..189038
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRAAKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHERFPERANIGFMQVVSRDHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgagctgatccgccggctggccgatcggcacctgggcgtc
ggctttgaccagatgctggtggtagaaccgccttacgatcccgagctggattttcactac
cgaatttttaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcgcgctgtttc
gcgcgctttgtgcggctgaaagggttgaccaacaagcgcgatatccgcgtcagcacccaa
accgggcgtatggtgctcagcgtcaccgacgacgatctggtgtgcgtcaacatgggtgag
ccgaatttcgatccgcaggcggtgccgttccgcgccgccaaggcggaaaagacctacatc
atgcgcgcggcggaacataccgtgctgtgcggcgtggtgtcgatgggcaacccgcattgt
gttttgcaggtggatgatgtaaaaaccgccaaggtggagctgcttgggccggtgctggaa
gggcacgagcgcttcccggaacgggccaacatcggctttatgcaagtggtcagccgcgat
cacatcaagctgcgcgtttacgagcgcggcgccggtgaaacgcaggcctgcggcagcggc
gcctgcgcggcggtggcggtagggatccaacaggaattgctgtcagaagaggtgcatgta
gaactgccgggcggcagcctgcatattcgctggaaagggccgggcaatccgctgtttatg
accggtccggcaacccatgtctatgacggatttattcatctatga

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