Serratia sp. SCBI: SERRSCBI_00805
Help
Entry
SERRSCBI_00805 CDS
T03314
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sers
Serratia sp. SCBI
Pathway
sers00300
Lysine biosynthesis
sers00470
D-Amino acid metabolism
sers01100
Metabolic pathways
sers01110
Biosynthesis of secondary metabolites
sers01120
Microbial metabolism in diverse environments
sers01230
Biosynthesis of amino acids
Module
sers_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SERRSCBI_00805 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SERRSCBI_00805 (dapF)
Enzymes [BR:
sers01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SERRSCBI_00805 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AIM19800
LinkDB
All DBs
Position
188214..189038
Genome browser
AA seq
274 aa
AA seq
DB search
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRAAKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHERFPERANIGFMQVVSRDHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgagctgatccgccggctggccgatcggcacctgggcgtc
ggctttgaccagatgctggtggtagaaccgccttacgatcccgagctggattttcactac
cgaatttttaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcgcgctgtttc
gcgcgctttgtgcggctgaaagggttgaccaacaagcgcgatatccgcgtcagcacccaa
accgggcgtatggtgctcagcgtcaccgacgacgatctggtgtgcgtcaacatgggtgag
ccgaatttcgatccgcaggcggtgccgttccgcgccgccaaggcggaaaagacctacatc
atgcgcgcggcggaacataccgtgctgtgcggcgtggtgtcgatgggcaacccgcattgt
gttttgcaggtggatgatgtaaaaaccgccaaggtggagctgcttgggccggtgctggaa
gggcacgagcgcttcccggaacgggccaacatcggctttatgcaagtggtcagccgcgat
cacatcaagctgcgcgtttacgagcgcggcgccggtgaaacgcaggcctgcggcagcggc
gcctgcgcggcggtggcggtagggatccaacaggaattgctgtcagaagaggtgcatgta
gaactgccgggcggcagcctgcatattcgctggaaagggccgggcaatccgctgtttatg
accggtccggcaacccatgtctatgacggatttattcatctatga
DBGET
integrated database retrieval system