Serratia sp. SCBI: SERRSCBI_00825
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Entry
SERRSCBI_00825 CDS
T03314
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03420
Nucleotide excision repair
sers03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SERRSCBI_00825 (uvrD)
03430 Mismatch repair
SERRSCBI_00825 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_00825 (uvrD)
Enzymes [BR:
sers01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SERRSCBI_00825 (uvrD)
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SERRSCBI_00825 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SERRSCBI_00825 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AIM19804
LinkDB
All DBs
Position
191451..193613
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLEANLPQDFQILDSDDQL
RLLKRIIKALNVDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNSIQYAWIRLLAGGN
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILKAANTLIANN
DGRMGKNLWTEGGEGEPISLYCAFNELDEARFVVNRIKTWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRELMQDKVLAGRAASALQRFIELVESLAHETADMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVNHRRMG
TPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctccgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggcggcg
ccgcgcagcaacctgttggttctggccggagcgggcagcggcaagacgcgggtgctggtg
catcgcatcgcctggctgctgtcggtggagaactgctcaccgtattcgatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgccaccgtatcgaacatctgatcggcacc
agccagggcggcatgtggatcggcactttccacggtctggcgcaccgcctgctgcgcgct
catcatctggaagccaacctgccgcaggatttccagatcctcgacagcgacgaccagctg
cggttgctcaagcgcatcatcaaggcgctgaacgtcgacgagaaacagtggccgccgcgt
caggcgatgtggtacatcaacggcaagaaagacgaaggcctgcgcccgcagcacgtcgag
acctacaacaacccggtagaggccacctggctgcgcatctaccaggcctatcaggaagcc
tgcgatcgcgcggggctggtggatttcgccgagctgctgctgcgcgcgcacgagctgtgg
ctgaacaagccgcatatcctcaaccactaccgcgagcgtttcaccaacgtgctggtggac
gaattccaggataccaacagcatccagtacgcctggatccgcctgctggcgggcggcaac
agcaacgtgatgatcgtcggcgacgatgaccagtctatctacggctggcgcggcgcgcag
gtggaaaacatccagcgcttcctgaaggatttccccggcgcggaaaccatccgcctggag
cagaactaccgttccaccagcaacatcctgaaagcggccaacaccctgatcgccaacaac
gacgggcgcatgggtaaaaacctgtggaccgaaggcggcgaaggcgagccgatttccctc
tactgcgccttcaacgaactcgacgaagcgcgctttgtggtcaaccgcatcaagacctgg
caagacaacggcggcgcgctgaacgattgcgccattttgtaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcagacggcgatgccgtaccgtatctacggcggccag
cggttcttcgaacgtcaggaaatcaaggatgcgctggcttacctgcgcctgatctccaac
cgcaacgacgacgcggcctttgagcgcgtggtcaacaccccgacgcgcggcatcggcgat
cgcaccctcgacgtggtgcgccaggcggcgcgcgatcgccagctgacgctgtggcaggcg
acgcgcgaactgatgcaggacaaggttctggccggccgcgccgcgtcggcgctgcagcgc
ttcatcgagctggtggagtcgctggcccatgaaaccgccgatatgccgctgcacgtgcag
accgatcgggtgatccgcgactccgggctgttcatcatgtatgagcaggaaaagggcgag
aagggacaggcgcgcatcgaaaaccttgaggaactggtgacggcgacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgctgcaggcattcctgtcgcacgcggcgctg
gaagcgggcgaaggccaggccgacgcctatcaggacgcggtgcagctgatgaccctgcac
tcagccaaggggttggagttcccgctggtgtttatcgtcggcatggaagaaggcatgttc
ccgagccagatgtcgctggacgaaggcggccgtctggaggaggagcgccgtctggcctat
gtgggcgtgacgcgcgccatgcagaaactgacgctgacctatgctgaaacgcgccgtctg
tacggcaaagaggtttatcaccggccgtcgcgctttatcggcgaattgccggaggagtgc
gtggaagaagtgcgcctgcgcgccagcgtatcgcgcccggtcaatcaccgccgcatgggc
acgccgatcagcgagaacgacaccggttacaagctgggccagcgcgtgcgtcatcccaag
tttggcgaaggcaccatcgtcaatctggagggcagcggcgagcacagccggctgcagatc
gccttcccgggtgagggcatcaaatggctggtggcggcctacgcgcgtttggaaacggta
taa
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