Serratia sp. SCBI: SERRSCBI_01170
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Entry
SERRSCBI_01170 CDS
T03314
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sers
Serratia sp. SCBI
Pathway
sers00071
Fatty acid degradation
sers00280
Valine, leucine and isoleucine degradation
sers00310
Lysine degradation
sers00362
Benzoate degradation
sers00380
Tryptophan metabolism
sers00410
beta-Alanine metabolism
sers00640
Propanoate metabolism
sers00650
Butanoate metabolism
sers00907
Pinene, camphor and geraniol degradation
sers00930
Caprolactam degradation
sers01100
Metabolic pathways
sers01110
Biosynthesis of secondary metabolites
sers01120
Microbial metabolism in diverse environments
sers01200
Carbon metabolism
sers01212
Fatty acid metabolism
Module
sers_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SERRSCBI_01170 (fadB)
00650 Butanoate metabolism
SERRSCBI_01170 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SERRSCBI_01170 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SERRSCBI_01170 (fadB)
00310 Lysine degradation
SERRSCBI_01170 (fadB)
00380 Tryptophan metabolism
SERRSCBI_01170 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SERRSCBI_01170 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SERRSCBI_01170 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SERRSCBI_01170 (fadB)
00930 Caprolactam degradation
SERRSCBI_01170 (fadB)
Enzymes [BR:
sers01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SERRSCBI_01170 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SERRSCBI_01170 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SERRSCBI_01170 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SERRSCBI_01170 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIM19873
LinkDB
All DBs
Position
complement(262271..264460)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNAPGSVNKLDTRTVASLGEALTVLENQPELKGLLLRST
KAAFIVGADITEFLSLFAAPAEKLQEWLVFANNVFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLAEAALNMLQQAIDGKLNWRAARQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKNVDAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLTLGMNEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVENLIGE
DTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDETIAKVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMCKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDNKGKP
RKDNDEQTDALLAEVSQPRQTISDEEIVARMMIPMINEVVRCLEEKIVASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAERNESYYPVATPL
SDVATRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgataacggcatcgccgagctg
gtgttcaacgcaccgggctcggtcaacaagctggacacccgcaccgtcgccagcctgggc
gaagcgctcaccgtgctggaaaaccagccagagctcaaggggctgctgctgcgctccacc
aaagccgcatttatcgtcggcgccgatatcaccgaattcctttctctgttcgccgcgccg
gctgaaaagctgcaggagtggctggtattcgccaacaacgtctttaaccggctggaagat
ttgccggtgccgaccatttcggccattaacggctatgcgctcggcggcggttgcgaatgc
attttggcgaccgatttccgcgtcgcctcaccggacgcgcgcatcggcctgcctgaaacc
aaattgggcatcatgccgggcttcggcggctccgtccgcctgccgcgcctgctgggtaac
gacagtgcgctggaaatcatcgccgccggcaaagacgtcagcgccaaagacgccttgaaa
gtcggcctggtcgatgcggtagtggcaccggaaaaactggccgaagccgcgctcaacatg
ctgcaacaggcgatcgacggcaagctgaactggcgcgccgcgcgtcaaccgaagctggag
ccgctgaagctcagcccgatcgaggcggcaatgagcttcaccaccgccaaaggcatggtg
ctgcagaccgccggcaaacattacccggcgccgatgaccgcggtgaaaaccattgaagcc
gccgccaagctgggccgcgatgaagcgctgaaactggaaaccgccagcttcgtgccgttg
gcgcgctccaacgaagcgcgtgcgctggtcggcatcttccttaacgatcagttcgtgaag
ggccaggcgaaaaagctggccaagaatgtggacgcgccgaaacaggcggcggtgttgggc
gccggcatcatgggcggcggcatcgcttaccaatcggcgttgaaaggcgtgccggtgatc
atgaaggacatcagcgacaaatcgctgacgttgggcatgaacgaagcggccaagctgctc
aataagcagttggaacgcggcaagctggatggcctgaaaatggcgcaggtgctgtcgacc
attcagccgacgctggactacgccggcatcgagcgcgcgcaggtgatcgtcgaagcggtc
gtggagaacccgaaggtcaaagccgccgtgctgtcggaagtggaaaacctgatcggcgaa
gacaccgttctggcgtcgaacacctcgaccattccgattaatcatctggcaaaatcgttg
aagcgtccgcaaaacttctgcggcatgcacttctttaacccggtacaccgtatgccgctg
gtcgaaatcatccgcggcgaacaaaccagcgacgagaccattgccaaagtggtggcctac
gccagccgcatgggcaaaacgccgatcgtggtgaacgactgcccgggcttcttcgtcaac
cgcgtgctgttcccatacttcgccggcttcagcctgctgctgcgcgacggcgccgacttc
cgtcagatcgataaagtgatggaaaaacagttcggttggccgatgggcccggcctacctg
ctcgacgtggtgggcatcgacaccgcacaccacgcgcaagcggtaatggcggccggcttc
ccggagcgcatgtgcaaagactatcgcgacgccattgacgtgatgttcgacaaccagcgc
ttcggtcagaaaaaccagctgggcttctaccgctacagccaggacaacaaaggtaagccg
cgcaaggacaacgacgagcagaccgatgcgctgctggccgaagtgagccaaccgcgccag
accatcagcgacgaagagatcgttgcgcgcatgatgatcccgatgatcaacgaagtggtg
cgttgcctggaagagaagatcgtcgccagtccggccgaagccgatatggcgttggtctac
ggcatcggtttccctccgttccacggcggcgcgttccgctacctggatacgctcggcacc
gccaactacgttgagctggcccagcgttacgcacacctcggcgccctgtatcaagtgccg
gccggtctgcgcgccaaggccgaacgcaatgaaagctactacccggtggcgacaccgctg
tccgacgtcgcaacccgccaaccggcatga
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