Serratia sp. SCBI: SERRSCBI_02000
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Entry
SERRSCBI_02000 CDS
T03314
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sers03016
]
SERRSCBI_02000 (truB)
Enzymes [BR:
sers01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SERRSCBI_02000 (truB)
Transfer RNA biogenesis [BR:
sers03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SERRSCBI_02000 (truB)
Prokaryotic type
SERRSCBI_02000 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIM20039
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All DBs
Position
460363..461307
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQIVQERPVNFTQAQLDAALDTFRGDIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPIARMVTLEQLNALVAQAQEQAIAPGELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGLVRITEGEERKFIGVGDIAED
GRVAPRRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgacatccacggcgttctgttgctggacaagccg
cagggattgtcgtccaacgatgcgctgcaaaaagtaaaacgtctgtacaacgccaaccga
gcgggccataccggcgcgctcgatccgttggcgaccggcatgctgcctatctgcctgggc
gaagcgaccaagttttcgcaatacctgctcgattccgacaagcgctatcgggtgatcgcc
aagctggggcagcgtaccgatacctccgacgccgacgggcagatcgtgcaggaacgcccg
gtgaacttcacccaggcgcagctcgacgcggcgctggacaccttccgcggcgacatccag
caggtgccgtcgatgtattcggcgttgaaataccagggcaagaaactctacgagtatgcg
cgccagggcatcgaagtgccgcgcgaagcgcgcagcattacggtgtacgagctgcagttt
atccgctgggaaggggatgaactcgagctggagattcactgctcgaaaggcacctacatc
cgcaccatcactgacgatctcggcgagctgctgggttgcggcgcgcacgtgatctatctg
cgccgcctgcaggtggcgacttatcccatcgcgcgcatggtgacgctggaacagctgaac
gccttggtggcgcaggcgcaggaacaagcgatcgcgcccggcgagctgctcgatccgctg
ctgatgccgatggacagcccggttgagaactatccggaagtgaatttgctgccggtggtg
gcgggttacgtcaagcaggggcaaccggtgcaagtggccggcgcgccggcatccggcctg
gtgcgcatcaccgagggtgaagagcggaaattcatcggcgttggcgacatcgccgaggat
ggtcgcgtggcgccgcgccgcctggtggttgagcatttcgactga
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