Serratia sp. SCBI: SERRSCBI_02215
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Entry
SERRSCBI_02215 CDS
T03314
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sers03000
]
SERRSCBI_02215 (treR)
Transcription factors [BR:
sers03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SERRSCBI_02215 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_31
HTH_IclR
HTH_23
Peripla_BP_4
HTH_7
MarR_2
HTH_Tnp_ISL3
MarR
HTH_AraC
SpoIIID
HTH_Crp_2
AAA_18
Xre-like-HTH
CENP-B_N
HHH
TrmB
Motif
Other DBs
NCBI-ProteinID:
AIM20082
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Position
complement(503503..504450)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLLYQQGFDPIVMESQFETRLVQEHLHVLHQRNVD
GVILFGFTGLTAAMLKPWQEKMVVMVREYDGFSSVCYDDAGAVNLLMDRLYQQGHRHIGY
LGVQLSDATTGQRRYQAYLDACERLTLTPRATLGELSYQSGFQHAAEVIDAHTSALICAS
DSIALGAIKYLQQQPTRAIQVCAIGNTPLLSFLFPDTLSVEFGYGSAGLLAAQQLLAQLS
GEQGIRRLVVPSKLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaggacatcgcgcgcctgagcggcgtaggcaaatccacc
gtctcacgcgtgctgaacaatgaaggcagcgtgagcccgcaaacccgtgaacgggtggaa
gcggtgatccgtcagcaagggtttaccccctccaagtcggcgcgcgccatgcgcggccaa
agcgacaaagtggtgggcatcatcgtttcccgtctcgactcgccgtcggaaaaccaggcg
gtgcgcaccatgctgccgctgctgtatcagcaaggcttcgatccgatcgtgatggagagc
cagttcgaaacccgcctggtgcaggagcatctgcacgtactgcatcagcgcaacgtcgac
ggcgtgatcctgttcggcttcaccggcctgaccgcggcgatgctcaagccgtggcaggaa
aaaatggtggtgatggtgcgcgaatacgacggcttctcgtccgtctgctacgacgacgcc
ggcgcggtgaacctgttgatggatcgcctgtatcagcaagggcatcggcatatcggctat
ctgggggtgcagctcagcgacgccaccaccggccagcgccgctatcaggcctatctcgac
gcctgtgaacgcctcacgctcacgccgcgcgccacgctgggcgaactgagctaccagagc
ggtttccagcacgccgccgaagtgattgacgcgcacaccagcgcgctgatttgcgcctcc
gacagcatcgccttgggggcgatcaaatacctgcaacaacagccgacgcgcgccatccag
gtatgcgccatcggcaacaccccgctgctcagcttcctgttccccgacaccctgtcggtg
gagttcggctacggcagcgccggcctgctggccgcgcagcagttgctggcgcagctcagc
ggcgagcaggggatccgccgcctggtggtgcccagcaaactttcctga
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