Serratia sp. SCBI: SERRSCBI_03590
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Entry
SERRSCBI_03590 CDS
T03314
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sers03009
]
SERRSCBI_03590 (rumA)
Enzymes [BR:
sers01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SERRSCBI_03590 (rumA)
Ribosome biogenesis [BR:
sers03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SERRSCBI_03590 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
RrnaAD
MTS
Cons_hypoth95
Methyltransf_11
CMAS
PabTrmU54_TRAM_dom
Methyltransf_ANTKMT
FtsJ
Methyltransf_23
DHDPS
Ribosomal_L22
Methyltransf_4
DOT1
Motif
Other DBs
NCBI-ProteinID:
AIM20344
LinkDB
All DBs
Position
811128..812477
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AA seq
449 aa
AA seq
DB search
MAQFYSPKRRVTTRQSSQIFTVTVSDLDPFGQGVARHDGKAVFVPGVLPGEQAEIQLTED
KRQFAKGKLKRLLSRSPQRVEPRCPHFGVCGGCQQQHADEALQQQSKAAALVRMIARETG
VTPQQEPVIAGPEYGYRRRARLSLAWQPKLQRLMMGFRQAASSELVAVEHCPVLRPELEQ
LLAPVRACLSGLQAVRRLGHVELVLADNGPLLVLRHLDALKEADRQALLAFGEREKVAVY
LAPDSDRVEKLCGETPYYQVDGLRLDFSPRDFIQVNDAVNQQMVAQALEWLDIQPNDRVL
DLFCGMGNFTLPLARRAAAVVGIEGVATLIANGQYNAHKNKLNNASFFHENLEDDVERQP
WAAQGFDKVMLDPARAGAAGVMSHIVKLAPARVVYVSCNPTTLARDSKVLLNAGYRLARV
RMLDMFPHTGHLESMALFINERAPEVAAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctcccaaacgccgcgtgacgacccggcagagctcacaaatcttc
accgtgacggtgagcgatctcgatcctttcggccagggcgtggcgcgccacgacggcaaa
gcggtgttcgtgccgggcgtattgccgggcgagcaggcggaaatccagctgaccgaagac
aagcgccagttcgccaaaggcaagctcaagcgcctgctgagccgcagcccgcagcgggtg
gagccgcgctgcccgcatttcggcgtgtgcggcggctgccagcagcaacatgcggatgag
gcgctgcaacagcagagcaaggcggcggcgctggtgcgcatgatcgcccgcgaaaccgga
gtaaccccgcaacaggaaccggtgatcgccggcccggaatacggctatcgccgccgcgcc
cgtctgagcctggcgtggcagccgaagctgcagcgcctgatgatggggtttcgacaggcg
gcctccagcgagctggtggcggtggagcactgcccggtgctgcgcccggagctggaacag
ctgctggcgccggtgcgcgcctgcctgagcgggctgcaggcggtgcggcggctggggcat
gtggagctggtgctggcggataacggtccgctgctggtgctgcgccatctcgatgccctg
aaagaggcggatcgccaggcgctgttggcgtttggcgagcgggaaaaggtcgccgtttat
ctggcgcctgacagcgatcgggtggaaaaactgtgcggtgaaacgccgtattatcaggtt
gacgggctacgcttagacttcagtccgcgcgactttattcaggtcaatgacgccgtaaac
caacaaatggtggcgcaggcccttgaatggctcgacattcaacccaatgatcgggtgctg
gacctgttctgcggcatggggaatttcaccctgccgctggcgcgccgcgccgctgcggtg
gtgggcatcgaaggtgttgccacgctgatagcgaatgggcaatataatgcacataagaat
aagctgaataatgcgtcgttcttccatgagaatctggaggacgacgttgagcggcaacct
tgggcagcacaagggtttgataaggtgatgctggatcccgcccgcgccggtgcggccggg
gtgatgtcacacattgtaaaactggcgccggcgcgggtggtgtatgtttcctgtaacccc
accacgctggctcgcgacagcaaagtgctgttgaacgccggttatcgtcttgcgcgcgtg
cggatgttggatatgtttccgcacacggggcatcttgaatcaatggcgctgtttatcaac
gagcgcgcgccagaggtcgctgcaaagtag
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