Serratia sp. SCBI: SERRSCBI_04575
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Entry
SERRSCBI_04575 CDS
T03314
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_04575
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SERRSCBI_04575
Archaeal homologous recombinant proteins
SERRSCBI_04575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_21
cobW
AAA_15
GTP_EFTU
TsaE
NTPase_1
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AIM20539
LinkDB
All DBs
Position
complement(1010211..1013462)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLELTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDALHQRASGIELLNDEQRQSLTEQLAALSTQESALGEQTQR
QQQALSWLQQWQRLRQQQNEGQLRLDTAQREQTEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAALLAQQQEQQSAQLTPLQQAVEKTRQAQQTHAEHMRQQQQLIDEQVAP
LDHQIAQLLSTQAERRQAGDAAAQQCAQQQTTLEQLTAQRSQLTTQAAQFQQQLNALSEA
LAAQQQQQQALEAKTPLAPLRQRLSALADLRPTRQQLFTLSSLSQQIVKRLEQQRQELNI
GQHELTQLEPQLELIRQQFKQQKAHQADVEKTYALEQRIVGLEAERARLQPGAPCPLCGS
CEHPAVEQYQEVKLSETAQRLEQMKVQTEALQKQGVELRARYDNLQQQLQRQQQTIAQDE
QQLAAQQQQWRQLSAPLAFDFTLADGEQLSAWLNGCDDEERRGQQALQQHEQAAQAVQQA
KDALIALQTQQQQTQQQLALLEERFTLLQKAHADSLQQQQELQQRWQEGEKTLAERRAQR
LALFGEQQVAQVREQLRAKQIACEQASVQAAEQWQKAQELRERLAGQQAGLQQQLTQMQE
RLQQAQQQWQQALADSEFADETAFAAALLDDTLRRELQQRKERLQQRQVEAAALLTQATQ
TLEQHRQHRPEGLDEANADIDALTQSLAELAQQLKTLQLRQGELRNQLESDAARRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANRQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagcctgcggttaaaaaacctcaactcgctgcagggcgaatggaaaatt
gacttcaccgccgagcctttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatttgtctggcgctgtatcaccaaacgccgcgc
ctcaacgtcacgccgagccagaatgagctgatgacccgccacaccgccgagtcgctggcg
gaggtcgagtttgaggtcaagggcgtcggctatcgcgccttctggagccagcgccgcgcc
aaaaatgcgccggacggcaacctgcaggcgccgaaggtcgaactggcgcgccgcgaggac
ggcaagatcctggcggacaaagtgcgcgacaagctggaacttaccgccgccatcaccggg
ctggacttcggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgccttc
ctcaacgccgacgccaacgatcgcgccgagctgttggaagagctgaccggcaccgaaatc
tatgggcggctgtccgagcaggtgttcgagtcgcacaagcaagccaaaactgacctggat
gcgttgcaccaacgcgccagcggcatcgaactgctgaacgacgagcagcgccagtctctg
accgaacagctggcggcgctgagcacgcaggaaagcgccctcggcgagcaaacccagcgg
cagcaacaggcgctgagctggctgcaacaatggcaacgcctccggcaacagcaaaacgag
gggcaattgcggctggacaccgcccagcgcgagcagacagaggccgccccacagctgcag
cggctggcgctcagcgagccggccgagaaattgcggccgctgcgcggtgaacgcgatcgc
tgccgcgccgagctgcagacgatacagcagcaagcggctctgttggcgcaacagcaggaa
cagcagtcagcgcagttgaccccgctgcagcaggcggtggagaaaacccgccaggcgcag
caaacccatgccgagcatatgcggcaacagcaacagctgattgacgaacaggtcgccccg
ctcgatcaccagatagcccaactgctatcgacccaggccgagcggcgacaggccggcgat
gccgcagcgcagcagtgcgcccagcagcaaactacgctggagcagctcaccgctcagcgc
agccagctgacgacgcaggccgcacagtttcagcagcagttgaatgcgctgagtgaagcg
ctggccgctcaacagcaacagcagcaggcgctggaggcaaaaacgccgctggccccgctg
cgccagcgcctgagcgccctggcggatctgcgcccaacgcgtcagcagctatttactcta
tcctctttgtcgcagcaaatcgttaaacggctggaacagcagcggcaagagctaaacatc
ggtcaacatgaactgacccagttggagccacagctagaactcatccgtcagcaatttaag
cagcagaaagcacaccaggccgatgttgaaaaaacctatgcgctggaacaacggatcgtg
ggtctggaggccgagcgcgcccgtttgcaacccggcgccccctgcccgctgtgcggctca
tgcgagcacccggcggtagagcaataccaagaggtaaaactgtcagaaactgcgcaacgt
ctggagcaaatgaaagtccagaccgaagcattgcaaaaacaaggcgtcgagctgcgagcc
cgttacgacaacctgcaacagcagttgcagcgccaacagcaaaccatcgcgcaggatgaa
cagcagctggctgcccaacagcagcagtggcggcagctcagcgcaccgctggcgttcgac
tttacgctggcggatggcgagcaactcagcgcctggctgaacggctgcgacgacgaagaa
cggcgcgggcaacaagcgctgcagcagcatgaacaggcggcgcaggcggtacagcaggcg
aaagacgcgctcatcgctctgcaaacgcagcagcagcagacgcagcaacaactggcgttg
ctcgaagaacgctttacgctgctgcagaaagcccacgccgacagcctgcaacagcagcaa
gagctgcaacaacgctggcaagaaggcgagaaaaccctcgctgaacgacgtgcgcagcgg
ctggcgctgttcggcgaacagcaggtggctcaggtgcgcgaacagctgcgcgccaaacaa
atcgcctgcgaacaggccagcgttcaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgaacgcctggccggccagcaggccgggctgcaacaacagctcacccagatgcaggag
cggctgcagcaggcgcagcagcagtggcagcaggcgctggccgacagcgagttcgccgat
gaaactgccttcgccgccgcgctgctggacgacaccctgcgtcgcgaattgcagcagcgc
aaagagcggctgcaacagcgacaggtggaggccgccgccctgctgacacaggcgacgcaa
acgctggagcagcatcggcagcaccgtcctgaagggctggatgaggccaatgcggatatc
gatgcgctcacccaatcgctggccgagctggcacagcagttgaaaacgttgcagctgcgt
cagggcgaactgcgcaatcagctggaaagcgatgccgctcgtcgcctcaatcagcaggcg
ctgttcgagcaaatcgcccgcagccagcaagactacgacgactggagctacctcaaccag
ctgatcggctcgaaagaaggcgacaagttccgccgcttcgctcaggggttgacgctcgat
catctggtctatctggccaaccggcagctcggccggctgcacgggcgctacctgctgcag
cgcaagaccagcgatgcgctggagctgcaggtggtggacacctggcaggcggacgcgctg
cgcgatacccgcaccctgtccggcggcgagagcttcctggtcagcctggcgttggcgctg
gcgttgtccgatctggtcagccataaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctggacgccgaaaccctcgacaccgcgctggatgcgctggacagcctgaac
gcctccggcaaaaccatcggcgtgatcagccacgtcgaggcgatgaaagaacgcattccg
gtgcagatcaaggtgaaaaaggtcaacgggcttggcgtcagccggctggaagcgcacttc
aggctggaatga
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integrated database retrieval system
