Serratia sp. SCBI: SERRSCBI_04580
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Entry
SERRSCBI_04580 CDS
T03314
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_04580
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SERRSCBI_04580
Archaeal homologous recombinant proteins
SERRSCBI_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
ATPgraspMvdD
Motif
Other DBs
NCBI-ProteinID:
AIM20540
LinkDB
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Position
complement(1013459..1014691)
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AA seq
410 aa
AA seq
DB search
MRLIHTSDWHLGQYFFTKSRAAEHQAFLNWLIEQIEQQQVDALIVAGDLFDTGSPPSYAR
ELYNRFVVELQRTGCQLVVLGGNHDSVATLNESRELLSCLNTTVIASAQGAPEQQIVVLN
RRDGQPGAVLCAIPFLRPRDLLTSRAGESGAQKQQALQEAIAEHYQTLYQAACERRDQLG
LPLPIVATGHLTTVGVTTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQNVAKSEH
IRYSGSPIPLSFDELGKAKSVFLVDFADGALQRVDALTIPQFQPMQLIKGDLAEIERQLR
QFADYAGERPVWLDIEVATQDYLSDIQRRIQLLADELPVEVVLLRRSKEQRRQAIAQQDK
ETLNELSVNEVFERRLAQEAEMPETRQQRMRQMFRQVVEAVQHNAEETNS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacctctgactggcaccttggccagtactttttcaccaaaagccgc
gccgccgagcaccaggcttttctgaactggctgatcgaacagatcgaacagcaacaggtg
gatgcgctgatcgtcgccggggatctgttcgataccggctcaccgcccagctatgcccgc
gagctgtacaaccgcttcgtggtggaactgcagcgcaccggctgccagttggtggtgctg
ggcggcaaccacgactcggtggcgacgctgaacgaatcgcgggagctgctctcctgcctg
aacaccacagtgatcgccagcgcgcagggcgccccggaacagcaaatcgtggtgctgaac
cggcgcgacggccagccgggcgcggtgctgtgcgccattccgttcctgcggccgcgcgat
ctgctcaccagccgcgccggcgaatccggcgcgcagaaacagcaggcgctgcaggaagcc
atcgccgaacattatcagacgctgtatcaggcggcctgcgagcgccgcgaccagctgggc
ttgccgctgccgatcgtcgccaccggccacctgaccaccgtcggcgtcaccacctccgac
tcggtgcgcgacatctatatcggcaccctcgacgccttcccggcgcaggccttcccgccc
gccgactatatcgcgctgggccacattcaccgcgcgcagaacgtcgccaaatcggagcat
attcgctatagcggctcgccgatcccgctcagcttcgatgagctgggcaaagccaaaagc
gtcttcctggtggatttcgccgacggcgccctgcagcgggttgacgcattaacgatcccg
cagttccagcccatgcagctgatcaaaggcgatctggccgagatcgaacggcagctgcgg
caatttgccgactatgccggcgagcggccggtgtggctggatatcgaagtggcgacgcag
gactacctcagcgacatccagcgccgcatccagctgctggcggatgagctgccagtggaa
gtggtgctgctgcggcgcagcaaagagcagcgccgccaggcgattgcgcagcaggataag
gaaacgctgaacgagctgagcgtcaacgaggtgttcgaacgcaggctggcgcaggaggct
gagatgcccgaaacgcgccaacagcggatgcgccagatgttccgccaggtggtcgaggcg
gtgcagcacaacgccgaggagacaaattcatga
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