Serratia sp. SCBI: SERRSCBI_05080
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Entry
SERRSCBI_05080 CDS
T03314
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03030
DNA replication
sers03430
Mismatch repair
sers03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SERRSCBI_05080
03430 Mismatch repair
SERRSCBI_05080
03440 Homologous recombination
SERRSCBI_05080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sers03032
]
SERRSCBI_05080
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_05080
Enzymes [BR:
sers01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SERRSCBI_05080
DNA replication proteins [BR:
sers03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SERRSCBI_05080
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SERRSCBI_05080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_14
ResIII
EAL
AAA_2
AAA_assoc_2
nSTAND3
TsaE
AAA_7
AAA_24
Mg_chelatase
SKI
PIF1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIM20638
LinkDB
All DBs
Position
1112511..1114469
Genome browser
AA seq
652 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
DQIRQQLETVLTAEQITSDARALQLLARAADGSMRDALSLTDQAIAMGQGQVTAATVSQM
LGTLDDEQPLAILEALVSADGEKVMAQVAQAASRGVDWENLLVETLALLHRIAMVQLLPS
MLDNHYAAVEQRLRELARTLPPADVQLYYQTLLVGRKELAYAPDRRMGVEMTLLRALAFH
PKAVIPEPVALVQTAPAPMAQPQQAASPQPPQFQDAPPPLGQPAAPQRQSSTPLPDATAQ
LLKARSQLQRQQGASTPKKNEPAAPGIARPANSALGRLASVTERSQQRLAEKKVPEKPAK
PEAYRWRAQTEPEAAPEPLATPKALRTALEHEKTPELAAKLVVESLERDAWAAEIDKLKI
PKLVQQLALNAFKQQPEPGKISLHLRSSQRHLNSPSAQKTLADALGELYGSPIELTVVED
DNPAERTPLEWRQAIYEEKLAQARQSIEADTNIQTLRRFFDADLDEESIRPL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctcgcccgtaagtggcgccctcaaacgttcgcagacgtggtcggc
caggaacatgtcctgaccgcgctggccaacggcctctcgctggggcggatccatcacgcc
tatctgttctcgggcacgcgcggcgtggggaaaaccaccatcgcccgcttgctggccaaa
ggcctgaactgtgaaaccggcatcaccgccacgccgtgcggccaatgcgacaactgccgc
gagatcgagcaggggcgcttcgtcgatctgatcgagatcgacgccgcttcccgaaccaag
gtggaagatacccgcgatctgctggacaacgtccagtacgcgccggcgcgcggccgcttc
aaggtctacctgatcgatgaagtgcacatgctctcgcgccacagcttcaacgcgttgctg
aagacgctggaagagccgccgccgcacgtcaaattcctgttggccaccaccgatccgcaa
aaattgccggtgaccattctttcccgctgcctgcagtttcacctcaaagcgctggacgtc
gatcagatccgccagcagctggaaactgtgctgacggcggagcagatcaccagcgacgcc
cgcgcgctgcagctgctggcgcgcgccgccgacggcagcatgcgcgatgcgctgagcctg
accgatcaggcgatcgccatggggcaggggcaggtgacggccgcaaccgtcagccagatg
ctcggcacgctcgatgacgagcagccgctggcgatcctcgaagcgctggtcagcgccgac
ggtgaaaaggtgatggcgcaggtcgcgcaggccgcttcgcgcggcgtggattgggaaaac
ctgctggtggagacgctggcgttgctgcaccgcattgcgatggtgcaactgctgccttcg
atgctcgacaaccactacgccgccgtggaacaacggctgcgtgagctggcgcgcaccctg
ccgccggccgatgtgcaactctattaccagacgctgttggtgggccgcaaagagctggcc
tatgcgccggatcgccgcatgggggttgagatgaccctgctgcgcgcgctggcgtttcac
ccgaaagcggtgatcccggagccggtggcgttggtgcagaccgcgccggcgccgatggcg
cagccgcagcaggccgcatcgccacagccgccgcagtttcaggacgcgccgccgccgcta
gggcagccggccgcgccgcagcgacaatcatcgactcctttaccggatgccaccgcccag
ctgttgaaagcgcggtcccagctgcaacggcagcagggagcatccacaccaaaaaagaat
gagccggcggcgccaggaatagcgcggccggcaaactcggcgctggggcgtttggcttcc
gtgaccgagcgcagccagcagcgcctggcggagaagaaggtgccggaaaaaccggcgaaa
ccggaagcctatcgttggcgcgcgcagactgagcccgaggcggcgccggaaccgctggcg
acgccgaaagcgctgcgcacggcgttggagcacgagaaaacgccggagctggccgccaag
ctggtggtggagtcgctggagcgcgacgcctgggcggcggaaatcgataagctgaagatc
ccgaaactggtgcagcagctggcgttgaacgccttcaagcagcagccggagccgggcaag
attagcctccatctgcggtcttcgcagcgccatctgaattcgccttcggcgcagaagacg
ctggccgacgcgctcggtgagctgtacggcagcccgatcgagctgaccgtggtggaggac
gataatccggcggagcgcaccccgctggaatggcgacaagccatctatgaggaaaagctg
gcgcaggcgcgccagtccatcgaagcggataccaacattcagacgctgcgccgattcttc
gacgcggatctggatgaagagagtattcgccccctttaa
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